CAZyme Information

Basic Information
SpeciesMalus domestica
Cazyme IDMDP0000312089
FamilyGH18
Protein PropertiesLength: 561 Molecular Weight: 63302.9 Isoelectric Point: 4.8501
ChromosomeChromosome/Scaffold: 01939049 Start: 34349 End: 38287
Description
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18251928.5e-21
  VPIDNEIDFHFILGFAIDADSSGKQQNGIFSPYWQSTLTPQSVAAIKEKNPNVKVMASLSGWSLGDKVLHWYNPTNPKKWVSNAVSSLGSIITTYHLDGI
  DIDYENFPKRGNSSSFAFCIGELITGLKKKGLISVASIAPFYSTAAPYVQLFDDYADVIDYVNHQFYT
Full Sequence
Protein Sequence     Length: 561     Download
MHDSDGKLMM EYIGATGVPX TFDSVPIDNE IDFHFILGFA IDADSSGKQQ NGIFSPYWQS    60
TLTPQSVAAI KEKNPNVKVM ASLSGWSLGD KVLHWYNPTN PKKWVSNAVS SLGSIITTYH    120
LDGIDIDYEN FPKRGNSSSF AFCIGELITG LKKKGLISVA SIAPFYSTAA PYVQLFDDYA    180
DVIDYVNHQF YTDKVXTPKX YLQAFKIRAA QFGKEKLLPA YEVDGRGIQG DAFFDALTLL    240
QTNGFXINGV MIFSADASLK NNFHYERKSQ AFLLNSTTPI TARARPFARE GIRPLRVXWF    300
ALTSXXLIGN MSRLKLSLQR LVMVMWVYGV IICKNLGDNK QLIVKQFFSD LYELYLEKTG    360
QPIIRKEAKV MENDISLCQE TVEAKVEAKE QVIFLDENLV DEDLRKHDNS EVEAQEIQGM    420
SESKSVMTLE NHESSKLDLN SIVDQTRELG KEEYFDSQLP YFDLIYGINF MIIPPKYTES    480
WASQVEELIF LTRELSTSYQ DRFKTNSRSS SLQVDESDVG QKSDYFTHMH EVDDVIRTQG    540
SRDGVAGDSA TADGRLTALQ L 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06548GH18_chitinase4.0e-936132101+
smart00636Glyco_182.0e-1234192174+
cd00598GH18_chitinase-like3.0e-159191191+
pfam00704Glyco_hydro_188.0e-1734191165+
cd06544GH18_narbonin2.0e-998258257+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAE98134.105273151421chitinase A [Pteris ryukyuensis]
EMBLCAN65355.104277138409hypothetical protein [Vitis vinifera]
RefSeqXP_002274616.10127759333PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002328469.10102781267predicted protein [Populus trichocarpa]
RefSeqXP_002517257.1092781268Chitinase 1 precursor, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B082752275A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A082752275A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A4e-2682594267A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3qok_A0.0055413587161A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae
PDB1h0i_B0.0066717078184A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY83128627142700
JG18611919541950
CO16532328142730
HO82598627652730
DY61835027482730
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26810.1Bradi3g26840.1
Carica papayaevm.model.supercontig_139.6
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511morange1.1g046094m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna14019.1-v1.0-hybridmrna15882.1-v1.0-hybridmrna14034.1-v1.0-hybridmrna17899.1-v1.0-hybrid
mrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Linum usitatissimumLus10005172
Malus domesticaMDP0000904158MDP0000885802MDP0000644797
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28050.1LOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036765mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny