| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000317729 |
| Family | CBM43 |
| Protein Properties | Length: 528 Molecular Weight: 58386.8 Isoelectric Point: 9.533 |
| Chromosome | Chromosome/Scaffold: 04288116 Start: 20373 End: 22122 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 374 | 452 | 1.1e-26 |
| WCMVAKGANQSAVASALSYACSQGNKTCDPIQPGGKCFKPDSLAWHASYAFSAYWSQFRKAGGSCYFGGLATQTIKDPR | |||
| GH17 | 26 | 347 | 0 |
| VGVNYGQLGNNLPPPSQSVKLIQSLNAKRVKLYDANPKILAALRNTDLQVSIMVPNELISNISSNQTLADQWVRTNVVPFYPDTLIRYLLVGNEILSQPN KQIWFNLVPAMRKIKAALKTHRITKVKVGTPLAMDVLESSFPPSNGTFRSDISGSVIKPMLKFINKTKSFFFVDLYTYFPWSSDPTHIDLGYALLESKNI TVTDPASGLTYHNLFDQMVDALIFAMKRLGYPDTRIWIAETGWPSGGDYDQIGANIRNAATYNRNVVKKFNAKPPVGTPARPGAVLPSFVFALFNENTKP GPSTERNFGFLYPNGSNVYPID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 528 Download |
| MELGLLPVLI LCLSASISSA ELVAKVGVNY GQLGNNLPPP SQSVKLIQSL NAKRVKLYDA 60 NPKILAALRN TDLQVSIMVP NELISNISSN QTLADQWVRT NVVPFYPDTL IRYLLVGNEI 120 LSQPNKQIWF NLVPAMRKIK AALKTHRITK VKVGTPLAMD VLESSFPPSN GTFRSDISGS 180 VIKPMLKFIN KTKSFFFVDL YTYFPWSSDP THIDLGYALL ESKNITVTDP ASGLTYHNLF 240 DQMVDALIFA MKRLGYPDTR IWIAETGWPS GGDYDQIGAN IRNAATYNRN VVKKFNAKPP 300 VGTPARPGAV LPSFVFALFN ENTKPGPSTE RNFGFLYPNG SNVYPIDLSG KTPESEYAPL 360 PVATNNEPYK GPIWCMVAKG ANQSAVASAL SYACSQGNKT CDPIQPGGKC FKPDSLAWHA 420 SYAFSAYWSQ FRKAGGSCYF GGLATQTIKD PRCEWSIDCI VPINRPLTYR KMQILGHIVQ 480 VSPXRCNCVM LLLTRILLLX FRLRILQVPR CQTXSDEGYN GTMTVSFP |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 9.0e-19 | 374 | 445 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-30 | 374 | 451 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-110 | 26 | 347 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65039.1 | 0 | 16 | 455 | 15 | 455 | putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 1 | 451 | 1 | 455 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683538.1 | 0 | 16 | 455 | 15 | 455 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002303070.1 | 0 | 5 | 451 | 2 | 449 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 1 | 451 | 2 | 453 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 26 | 348 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 26 | 348 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 26 | 348 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 0 | 25 | 349 | 1 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
