y
Basic Information | |
---|---|
Species | Malus domestica |
Cazyme ID | MDP0000319522 |
Family | CE10 |
Protein Properties | Length: 415 Molecular Weight: 46861.2 Isoelectric Point: 8.5363 |
Chromosome | Chromosome/Scaffold: 004793191 Start: 2444 End: 4180 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 76 | 328 | 0 |
LNRVYQFAPQNESQWGIVDLEQPLSTTKVVPVIIFFHGGSFTHSSANSAIYDTFCRRLVNTCKAVVVSVNYRRSPEHRYPCAYEDGWAALKWVKSRKWLQ SGKGKDLKVHVYLAGDSSGGNIAHHVAVKAAEAEVEVLGNILLHPMFAGQKRTESEKRLDGKYFVTIQDRDWYWRAFLPEGEDRDHPACHVFGPRDKSLE GLKFPKSLVVVAGFDLMQDWQLAYVEGLKNAGQDVKLLFLKQATIGFYFLPNN |
Full Sequence |
---|
Protein Sequence Length: 415 Download |
MAGSNEVNVN ESKKVVPLNT WVLISNFKLA YNLLRRADGT FNRELAEFLD RKVPANTVPV 60 DGVFSFDHVD RATGLLNRVY QFAPQNESQW GIVDLEQPLS TTKVVPVIIF FHGGSFTHSS 120 ANSAIYDTFC RRLVNTCKAV VVSVNYRRSP EHRYPCAYED GWAALKWVKS RKWLQSGKGK 180 DLKVHVYLAG DSSGGNIAHH VAVKAAEAEV EVLGNILLHP MFAGQKRTES EKRLDGKYFV 240 TIQDRDWYWR AFLPEGEDRD HPACHVFGPR DKSLEGLKFP KSLVVVAGFD LMQDWQLAYV 300 EGLKNAGQDV KLLFLKQATI GFYFLPNNEH FYCLMEEMKT FVNPDWFCSA ASEPYVRVLV 360 SAAGKDWNSF IGFGIATGCK SRRRTCHGDA TLSVSQKHMA VRDMTWDAAR VXFPV 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00312 | Esterase_lipase | 0.0006 | 97 | 169 | 82 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG2272 | PnbA | 8.0e-6 | 106 | 169 | 77 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 2.0e-7 | 107 | 198 | 95 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 6.0e-30 | 106 | 329 | 227 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 6.0e-66 | 108 | 324 | 218 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABQ96123.1 | 0 | 1 | 345 | 1 | 343 | gibberellic acid receptor-b [Gossypium hirsutum] |
EMBL | CAN87128.1 | 0 | 1 | 344 | 1 | 342 | putative gibberellin receptor [Cucurbita maxima] |
RefSeq | XP_002302813.1 | 0 | 1 | 345 | 1 | 343 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320380.1 | 0 | 1 | 345 | 1 | 343 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524767.1 | 0 | 1 | 345 | 1 | 343 | Gibberellin receptor GID1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 1 | 343 | 8 | 349 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 2zsh_A | 0 | 1 | 343 | 8 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 0 | 2 | 347 | 1 | 352 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 0 | 2 | 347 | 1 | 352 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 0 | 2 | 347 | 1 | 352 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DT574934 | 323 | 19 | 341 | 0 |
HO779605 | 357 | 1 | 357 | 0 |
DT560413 | 308 | 18 | 325 | 0 |
HO795605 | 330 | 17 | 345 | 0 |
DT560413 | 35 | 307 | 341 | 0.00000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|