| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000321839 |
| Family | GH5 |
| Protein Properties | Length: 470 Molecular Weight: 53484.6 Isoelectric Point: 5.4421 |
| Chromosome | Chromosome/Scaffold: 018286199 Start: 32506 End: 34427 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 86 | 416 | 3.8e-34 |
| NDQPFYVNGFNTYWLMVFSADQSTRGKVTDLFKQAASVGLTVCRTWAFNDGQWRALQKSPSVYDEEALDFVISEARKYKIRLILSLTNNWDAYGGKAQYV KWGKAAGLNLTSDDDFFTHPTLKSYYKAHTVLNRVNTLTNITYKDDPTVFAWELMNEPRCTSDPSGNKLQDWIQEMAVYVKSVDPKHLVEIGLEGFYGPS APARVQFNPNTYAQQVGTDFIRNHQVLGVDFASAHIYADSWISQSISDVHLQFTKSWMEAHIEDAEXYLGMPVVFSEFGISSNDPGYNSSFRDTLLSTVY KTILNSTRKGGSGGGSLLWQLFPDGTDYMDD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 470 Download |
| MDGRKRKMXT QNIVLVTIFM IFISHCSSTF FDASGFEQLE TVVENVEDHL AYPSTNDWYP 60 VEELNDGMED NEWQLVQKKG NQFVLNDQPF YVNGFNTYWL MVFSADQSTR GKVTDLFKQA 120 ASVGLTVCRT WAFNDGQWRA LQKSPSVYDE EALDFVISEA RKYKIRLILS LTNNWDAYGG 180 KAQYVKWGKA AGLNLTSDDD FFTHPTLKSY YKAHTVLNRV NTLTNITYKD DPTVFAWELM 240 NEPRCTSDPS GNKLQDWIQE MAVYVKSVDP KHLVEIGLEG FYGPSAPARV QFNPNTYAQQ 300 VGTDFIRNHQ VLGVDFASAH IYADSWISQS ISDVHLQFTK SWMEAHIEDA EXYLGMPVVF 360 SEFGISSNDP GYNSSFRDTL LSTVYKTILN STRKGGSGGG SLLWQLFPDG TDYMDDGYAI 420 VLSKSPSTAN IITLHSTRLA LFNSRCSWKC RWGCKKKHPI EGFLLRYDEL 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.008 | 227 | 322 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 0.0008 | 228 | 369 | 146 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 1.0e-25 | 115 | 374 | 265 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU19893.1 | 0 | 67 | 470 | 55 | 462 | unknown [Glycine max] |
| EMBL | CBI18019.1 | 0 | 1 | 468 | 1 | 470 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273389.1 | 0 | 70 | 468 | 6 | 409 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323680.1 | 0 | 61 | 468 | 4 | 413 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528703.1 | 0 | 1 | 470 | 1 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 75 | 440 | 6 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 84 | 431 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 84 | 431 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 84 | 431 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 84 | 431 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
