| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000322330 |
| Family | GH5 |
| Protein Properties | Length: 614 Molecular Weight: 70147.8 Isoelectric Point: 8.8992 |
| Chromosome | Chromosome/Scaffold: 011381403 Start: 8818 End: 23424 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 234 | 560 | 3.3e-35 |
| DGKAFYINGWNSYWLMDQSVDEYRKPRVRKILQAGAKMGLTVCRTWAFNDGEYNALQISPGHFNEEVFKALDHVIVEARQQGIRLLLCLVNNLQAYGGKT QYVKWAWEEGVGLSASNDSFFFDPSIRNYFKNYVKTILTRKNTLNGIEYRNDPTIFAWELINEPRCITDASGDTLQDWIEEMSAFVKAIDKNHLLTVGLE GFYGPKSPKRLTANPEMWASRLGSDFIRNSKIPNIDFASVHIYPDHWFHDEEFHENLKFVSKWMRSHIEDGXNELNKPVMFTEYGLSNQNKDFEPSQRER FYKTILDVIYKSAKKNRSGAGALAWQF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 614 Download |
| MGMYIRASVR HPPDFFVELP QILALLVQIA TPVVFVVVRM ACPLRLGASG GGIRAAFDVR 60 GACSDGSGHS GDVDXHRGSA GLLREAEEGV GGGREEDYER DCWDCDEDFV EGRELGGCWL 120 RCFGVRLKLN KTNLFRERLK FKKSSEIRIL LKFSQKGVKK FFKSAQNLGL FMILRYSAKK 180 KKMVVAGNGL FYPILGFVSC VAFIYLSFGN LGSNVSDEKK LSFVGRNGAQ FMLDGKAFYI 240 NGWNSYWLMD QSVDEYRKPR VRKILQAGAK MGLTVCRTWA FNDGEYNALQ ISPGHFNEEV 300 FKALDHVIVE ARQQGIRLLL CLVNNLQAYG GKTQYVKWAW EEGVGLSASN DSFFFDPSIR 360 NYFKNYVKTI LTRKNTLNGI EYRNDPTIFA WELINEPRCI TDASGDTLQD WIEEMSAFVK 420 AIDKNHLLTV GLEGFYGPKS PKRLTANPEM WASRLGSDFI RNSKIPNIDF ASVHIYPDHW 480 FHDEEFHENL KFVSKWMRSH IEDGXNELNK PVMFTEYGLS NQNKDFEPSQ RERFYKTILD 540 VIYKSAKKNR SGAGALAWQF LVEGMDEYND EFGIVPWKRP SEYKIIVEQS CRLARLKGPT 600 QQQRNLKDLC SQRK 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.003 | 381 | 476 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| COG2730 | BglC | 0.002 | 269 | 542 | 299 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 3.0e-7 | 358 | 530 | 175 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 1.0e-29 | 231 | 575 | 355 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95966.1 | 0 | 184 | 614 | 4 | 435 | unknown [Populus trichocarpa] |
| GenBank | ACN78665.1 | 0 | 172 | 614 | 1 | 443 | endo-beta-mannanase [Malus x domestica] |
| EMBL | CBI21857.1 | 0 | 184 | 614 | 1 | 432 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273772.1 | 0 | 180 | 614 | 2 | 437 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002330687.1 | 0 | 184 | 614 | 4 | 435 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 222 | 596 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 232 | 576 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 232 | 576 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 232 | 576 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 232 | 576 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
