Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000401070 |
Family | CE8 |
Protein Properties | Length: 317 Molecular Weight: 34210.4 Isoelectric Point: 6.3931 |
Chromosome | Chromosome/Scaffold: 012883422 Start: 20657 End: 22902 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 73 | 309 | 0 |
KVMQDGKGDFKTVTDAINSIPAGNTKRVIVHXGGGEYNEKIXIPRNKPFVTLYGSPXNMPNLTFDGTAQKYGTVNSATVIAESDYFVAANLLIKNSSPRP DGKRVGAQAVALRVSGNNSALYNCKLVGFQDTLCDDRGNHLFKDCYIEGTVDFIWGSGKSLYLNTELHVLGDTGITVITAQARDSASEDTGYSFVHCNIT GIGSGTYLGRAWRVRPQVVYAYTSMTEVVNPAGWSND |
Full Sequence |
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Protein Sequence Length: 317 Download |
MAGKNTCMGV HAALIMTILL TATVATADDN TPIPSDHSQI NTWFDNNXKP YTERQSTLDP 60 AVVTAEAGQT VIKVMQDGKG DFKTVTDAIN SIPAGNTKRV IVHXGGGEYN EKIXIPRNKP 120 FVTLYGSPXN MPNLTFDGTA QKYGTVNSAT VIAESDYFVA ANLLIKNSSP RPDGKRVGAQ 180 AVALRVSGNN SALYNCKLVG FQDTLCDDRG NHLFKDCYIE GTVDFIWGSG KSLYLNTELH 240 VLGDTGITVI TAQARDSASE DTGYSFVHCN ITGIGSGTYL GRAWRVRPQV VYAYTSMTEV 300 VNPAGWSNDN HPERDK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 5.0e-64 | 74 | 316 | 251 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 2.0e-66 | 69 | 306 | 238 | + putative pectinesterase | ||
PLN02773 | PLN02773 | 5.0e-67 | 71 | 316 | 259 | + pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-83 | 8 | 316 | 321 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 10 | 316 | 307 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38547.1 | 0 | 10 | 315 | 6 | 312 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277202.1 | 0 | 28 | 315 | 26 | 313 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309337.1 | 0 | 15 | 316 | 15 | 317 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 8 | 316 | 1 | 313 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 6 | 315 | 3 | 313 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1e-31 | 56 | 306 | 3 | 249 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-28 | 74 | 308 | 7 | 247 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-21 | 71 | 239 | 8 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-21 | 71 | 239 | 8 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-21 | 71 | 239 | 8 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |