y
Basic Information | |
---|---|
Species | Malus domestica |
Cazyme ID | MDP0000508660 |
Family | CBM43 |
Protein Properties | Length: 696 Molecular Weight: 75870.2 Isoelectric Point: 8.7051 |
Chromosome | Chromosome/Scaffold: 007446255 Start: 2360 End: 12166 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 582 | 661 | 6.3e-32 |
WCVAKSGAPQAALQAALDYACGMGSADCSQIQQGGSCYNPISLQNHASFAFNSYYQKNPVSTSCDFGGVATIVSANPSKK |
Full Sequence |
---|
Protein Sequence Length: 696 Download |
MADAGNDGCE DIEASVKKLS LGSSSSDSKQ LDPFGALLRL CGQSAPLKFG VMFFTYCVRV 60 CQGSYDAALI KAWEDWDEKC GSENDHPKAF PDNQESRSKD ERDLRSLKKH LGKYQSAREA 120 LLDPSFGHLF LDVHERAVWW QIRIRASEGY CLRPDKFLGV MGTYTLARQV VFFDRTLVGF 180 SYHASGNTTT SSPVRTISFL KQNKINLSQI RVFVEDPRVL STLSKTGVAV DLYLNERQVE 240 NLMSSKSSSK SWLKTHTMPF FSKADIKSII AIGGSDHTRK SKLPRVLSNL KTLHKVLTSL 300 PFDRRIKVSV AFSLPFLENL RRGNGKDLHR ICSFINEVRS SVIVEANVDG ELNMGDRFVQ 360 SVIEKAGLAH SVLPCNAVPM VLTIKSPAAP SATEVAEFTD KVSKALESET RITSRLVGLY 420 AEVDSMEDFA QKELKREEEQ ILPSSRREIL SDPHPKTTSH DVYGSPTIFP TNPTTPAVPT 480 TSPYTSSPTT VTVPATNPVT VTPVNPAAPV EVPSTTPIIL PPSNPVSSSV PVTNPATTPT 540 ITNPATTYPP PTGGVPSTTT PVTNPVTPPS TTNAPAVPGQ SWCVAKSGAP QAALQAALDY 600 ACGMGSADCS QIQQGGSCYN PISLQNHASF AFNSYYQKNP VSTSCDFGGV ATIVSANPSK 660 KKRTWRCFLK EHMQVLVQNA VPRQRFAFKF FVPNE* 720 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 0.001 | 178 | 311 | 136 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 6.0e-25 | 581 | 652 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-38 | 581 | 659 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28117.1 | 0 | 219 | 666 | 21 | 482 | unknown [Zea mays] |
EMBL | CAN65737.1 | 0 | 284 | 659 | 38 | 416 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276666.1 | 0 | 176 | 659 | 25 | 512 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319461.1 | 0 | 176 | 662 | 24 | 517 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512573.1 | 0 | 354 | 659 | 1 | 302 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.00000000002 | 581 | 659 | 12 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1ghs_B | 0.00001 | 178 | 315 | 1 | 138 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0.00001 | 178 | 315 | 1 | 138 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DW344230 | 230 | 176 | 404 | 0 |
CN898387 | 128 | 342 | 469 | 0 |
GO527021 | 123 | 176 | 298 | 0 |
FQ326860 | 220 | 222 | 441 | 0 |
FP034415 | 146 | 316 | 461 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|