Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000528781 |
Family | CBM43 |
Protein Properties | Length: 224 Molecular Weight: 24677.7 Isoelectric Point: 7.9813 |
Chromosome | Chromosome/Scaffold: 008473397 Start: 964 End: 6201 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 35 | 113 | 1.1e-27 |
WCVAKNNAEDAPLLTALNWXCGPGGADCSPIQQGGPCYDPADXQNTASYAFNDYFLKHGMTDDSCNFDNTAALTSLNPT |
Full Sequence |
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Protein Sequence Length: 224 Download |
MHKNIAFSII LSLALFCLLI LPSTAKDGVV TTELWCVAKN NAEDAPLLTA LNWXCGPGGA 60 DCSPIQQGGP CYDPADXQNT ASYAFNDYFL KHGMTDDSCN FDNTAALTSL NPTLQVQSRT 120 PERRVGDKEQ WQGRGKTSAL GLFFRLGEWW TPLLALTWLR HCFLGAKAAT QSLLGKLWRY 180 LGCRGRQEVT PVAAVTREGR EGWVGWARRR EEMKGWMGAG VEV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-18 | 34 | 105 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-30 | 34 | 113 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67357.1 | 2e-37 | 3 | 161 | 50 | 218 | unknown [Arabidopsis thaliana] |
EMBL | CAB68148.1 | 2e-36 | 3 | 113 | 85 | 195 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_567060.1 | 3e-37 | 3 | 161 | 9 | 178 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002279275.1 | 9.80909e-45 | 19 | 141 | 20 | 141 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326029.1 | 6e-37 | 1 | 114 | 1 | 115 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.00000000006 | 35 | 114 | 13 | 91 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |