| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000556230 |
| Family | CE8 |
| Protein Properties | Length: 242 Molecular Weight: 27133.3 Isoelectric Point: 9.7652 |
| Chromosome | Chromosome/Scaffold: 007527359 Start: 355 End: 2500 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 82 | 235 | 0 |
| KVMQYGGGNFKTITDAINSIPAGNTKRMFVYIKGGVYNEKITIPHNKPFVTFYGSPKSMPNITFDGTAQKYGTVYSGTLIVESDYFRANSAPEPDGIREG AQAVAVQISGNKAAFYNCKMIGYQDTLYDYKGLHLXKDCFIQGTVDFIFRKGKX | |||
| Full Sequence |
|---|
| Protein Sequence Length: 242 Download |
| MDDTRRILQS FQLWKANXGP FGHLMDDTRR ILQSFQLWKA NFVLRDANTV AHRLARFSLT 60 LEHPSTLDPA LVAAEHAPQV IKVMQYGGGN FKTITDAINS IPAGNTKRMF VYIKGGVYNE 120 KITIPHNKPF VTFYGSPKSM PNITFDGTAQ KYGTVYSGTL IVESDYFRAN SAPEPDGIRE 180 GAQAVAVQIS GNKAAFYNCK MIGYQDTLYD YKGLHLXKDC FIQGTVDFIF RKGKXLYLVR 240 N* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02773 | PLN02773 | 6.0e-37 | 80 | 230 | 168 | + pectinesterase | ||
| PLN02432 | PLN02432 | 1.0e-37 | 80 | 237 | 158 | + putative pectinesterase | ||
| pfam01095 | Pectinesterase | 5.0e-38 | 83 | 230 | 156 | + Pectinesterase. | ||
| PLN02682 | PLN02682 | 1.0e-42 | 87 | 237 | 164 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 7.0e-104 | 65 | 238 | 180 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU14235.1 | 0 | 62 | 238 | 52 | 234 | unknown [Glycine max] |
| EMBL | CAN78808.1 | 0 | 65 | 238 | 28 | 207 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI38547.1 | 0 | 65 | 238 | 53 | 232 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277202.1 | 0 | 65 | 238 | 54 | 233 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002336983.1 | 0 | 66 | 239 | 53 | 232 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 2e-19 | 78 | 230 | 7 | 160 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 1e-18 | 80 | 237 | 7 | 185 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 1e-18 | 80 | 237 | 7 | 185 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 1e-18 | 80 | 237 | 7 | 185 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_A | 1e-18 | 80 | 237 | 7 | 185 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO513714 | 189 | 56 | 238 | 0 |
| GO504417 | 183 | 62 | 238 | 0 |
| FC896493 | 183 | 62 | 238 | 0 |
| FC902493 | 183 | 62 | 238 | 0 |
| FC881152 | 183 | 62 | 238 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
