| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000616949 |
| Family | CE8 |
| Protein Properties | Length: 488 Molecular Weight: 54879.2 Isoelectric Point: 8.848 |
| Chromosome | Chromosome/Scaffold: 016475233 Start: 28 End: 18432 |
| Description | pectin methylesterase PCR fragment F |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 217 | 281 | 6.9e-24 |
| LRVRGYGFMAQDMTFENTTGPEKHQAIAMRYGTNQLVFYRCSFXGYQDTFYAKRQSQFYRDSEIY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 488 Download |
| MEPKESERMR AMREKRVTGE KEAKESSRRL GTNLWVPHGT LLQIQHDIAC HIPARVHHRS 60 TILSALGLPF PRGFVFGNSR ATSQWVTHHG SALVTFSLNF GVLTEPEASE LPKGLVLGRD 120 ENIHLRITPL GDVGCYLADM SKQRQKHTPF EPKTEMSYAQ DWEDGSIQIF GEFLNEEVAN 180 AAVMRTVLDK ARGGXRLANL RGGDELFADA DDAYELLRVR GYGFMAQDMT FENTTGPEKH 240 QAIAMRYGTN QLVFYRCSFX GYQDTFYAKR QSQFYRDSEI YYFRQRRSCA PKLQHIRGKT 300 YEKSSECGEG LQSREQSDQS TGIVIHNCHV TAAEDLRHVQ HSFRTYLGWS LWVYPRTVIM 360 KSTLNGXVDP TGRMLCNGSV GLXTLYYGEY MNFGGXADTC GRVKLLGYHV IRSTPDAKKF 420 IVRNFISGDS WIXRIGFPCL QAPLPNAQPL SPSGLMRTSS LGTPSSAXMP LQPSSHXSTV 480 PNIKGYF* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02916 | PLN02916 | 6.0e-54 | 219 | 438 | 233 | + pectinesterase family protein | ||
| PLN02484 | PLN02484 | 2.0e-54 | 221 | 436 | 223 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 7.0e-55 | 217 | 436 | 225 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 1.0e-55 | 219 | 438 | 241 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 8.0e-75 | 219 | 429 | 225 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77092.1 | 0 | 199 | 438 | 264 | 502 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI38888.1 | 0 | 202 | 438 | 20 | 254 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002314796.1 | 0 | 219 | 438 | 303 | 526 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511679.1 | 0 | 202 | 438 | 275 | 509 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002527782.1 | 0 | 199 | 438 | 286 | 524 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 8.96831e-44 | 199 | 438 | 76 | 314 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 7.00649e-43 | 217 | 436 | 85 | 308 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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