CAZyme Information

Basic Information
SpeciesMalus domestica
Cazyme IDMDP0000644797
FamilyGH18
Protein PropertiesLength: 455 Molecular Weight: 51059.2 Isoelectric Point: 9.429
ChromosomeChromosome/Scaffold: 017145176 Start: 7902 End: 10139
Description
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18572237.1e-21
  HFILSFAIDYTTQSHNPSPTNGDFNVFWDTENLTAAHVSAIKALHPNAKVALSLGGDTVGNKNVSFNPKSINSWVRNAVYSLTQIIRKYHLDGIDIDYEH
  FQTDPNTFAECIGRLLFSLKQNNIVSFTSIAPYDDDSVQPNYLALWGKYGHLIDYVNFQFYAYDKGT
Full Sequence
Protein Sequence     Length: 455     Download
MTSFKLLPFL FLQMFFTAAS MIKAAPANPK LFREYIGAEN KGVTFTEVPV DSNVEFHFIL    60
SFAIDYTTQS HNPSPTNGDF NVFWDTENLT AAHVSAIKAL HPNAKVALSL GGDTVGNKNV    120
SFNPKSINSW VRNAVYSLTQ IIRKYHLDGI DIDYEHFQTD PNTFAECIGR LLFSLKQNNI    180
VSFTSIAPYD DDSVQPNYLA LWGKYGHLID YVNFQFYAYD KGTTXTQFLK YFEMQSSNYK    240
GGXILVSFGT DNSGGLSPEX GFFAACTRLK RXGKLHGIFX WSADDSRKDH FRYEKQSQXF    300
LSTISSRMWR FKAFCPFPSF GLPNDKLIWH YDRKGIFSVK SAYHVARDWI QSRREAASSS    360
SANSSGEVWK KPWAARVPPK GGVRSIIRDD QGSFVAAAAK KLEHVYSPLQ AEALAARDGL    420
LLATQRGLQN FILGSNLLQI VAALRNSSAD QTYY* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06548GH18_chitinase8.0e-79615663+
smart00636Glyco_181.0e-977220158+
pfam00704Glyco_hydro_181.0e-1357219170+
cd00598GH18_chitinase-like5.0e-1450217173+
cd06544GH18_narbonin7.0e-11831286257+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002281665.1063027301PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002281729.1013021302PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002318148.1063023298predicted protein [Populus trichocarpa]
RefSeqXP_002531825.1013031296Chitinase 1 precursor, putative [Ricinus communis]
RefSeqXP_002532811.1063027302Chitinase 1 precursor, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B0313012273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A0313012273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A3e-34312864266A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3fnd_A0.00310322265173A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3co4_A0.00310322265173A Chain A, Crystal Structure Of A Chitinase From Bacteroides Thetaiotaomicron
Signal Peptide
Cleavage Site
24
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FQ317071267363020
FQ316586267363020
FQ317099267363020
DY618350296103020
FQ317155267363020
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26810.1Bradi3g26840.1
Carica papayaevm.model.supercontig_139.6
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511morange1.1g046094m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna14019.1-v1.0-hybridmrna15882.1-v1.0-hybridmrna14034.1-v1.0-hybridmrna17899.1-v1.0-hybrid
mrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Linum usitatissimumLus10005172
Malus domesticaMDP0000904158MDP0000885802MDP0000312089
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28050.1LOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036765mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny