| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000753730 |
| Family | CE8 |
| Protein Properties | Length: 206 Molecular Weight: 23310.5 Isoelectric Point: 9.3673 |
| Chromosome | Chromosome/Scaffold: 012257204 Start: 240 End: 1982 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 10 | 130 | 1.5e-32 |
| INNTEIHVVERNLTVITAQQRDSASEDSGFSFVHCKITGTTYARRTYLGRAWGSSPNVVVAYTDIADIVHPERWSDFGNPERESNLFYGEYNNWGQGSNI TIQARYTRKLSDAEAKPFISL | |||
| Full Sequence |
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| Protein Sequence Length: 206 Download |
| MVRIPPTYKI NNTEIHVVER NLTVITAQQR DSASEDSGFS FVHCKITGTT YARRTYLGRA 60 WGSSPNVVVA YTDIADIVHP ERWSDFGNPE RESNLFYGEY NNWGQGSNIT IQARYTRKLS 120 DAEAKPFISL GNIQGSKWLL PQVXGQRILG PHSRLGARLE LRNSQGRPWS IYPLRTPFXY 180 HPKLADCCCA FXISLXIWIV GMNMI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 1.0e-30 | 15 | 139 | 125 | + pectinesterase | ||
| PLN02304 | PLN02304 | 5.0e-32 | 25 | 141 | 117 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 4.0e-34 | 15 | 139 | 125 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 8.0e-40 | 15 | 141 | 127 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 3.0e-58 | 12 | 141 | 131 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002309338.1 | 4e-34 | 10 | 140 | 1 | 131 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318197.1 | 2e-34 | 13 | 140 | 233 | 360 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511043.1 | 2e-34 | 12 | 141 | 235 | 362 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| RefSeq | XP_002511044.1 | 1e-34 | 12 | 141 | 235 | 363 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| RefSeq | XP_002511045.1 | 3e-36 | 12 | 141 | 235 | 363 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0.0000001 | 24 | 139 | 180 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0.000004 | 24 | 139 | 184 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DW341795 | 161 | 10 | 137 | 0 |
| CA853990 | 131 | 12 | 141 | 3.9937e-43 |
| BQ641024 | 131 | 12 | 141 | 1.00053e-42 |
| BU645538 | 121 | 21 | 141 | 9.99995e-41 |
| CN496225 | 131 | 12 | 141 | 3e-40 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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