Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000775334 |
Family | GT47 |
Protein Properties | Length: 580 Molecular Weight: 66731.4 Isoelectric Point: 8.5009 |
Chromosome | Chromosome/Scaffold: 007808273 Start: 6114 End: 7853 |
Description | root hair specific 8 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 189 | 513 | 0 |
CEGRGVYVYNLPSKFNFDLIGQCRDMITWLDFCKYLKNEAMGEPIPKFGNGWYQTHQHSLEPIFHQRVMKHPCRVYNEDEAKLFYIPFYGGLDILRWHFK NVSSDVKDTLSLELITWLRKQRSWTKNSGKDHVIVLGKISWDFRRKDRSWGTRFLEIDQMKNPVKLLIERQPWQPNDIGIPHPTYFHPSSDEDIMAWQWK IISSHRKQLVSFAGAARPGQAKSIRSILIKQCSSSSEYGNQCRFVDCSLGGCDQPEPVIELFMESEFCLQPPGDSPTRKSLFDSLISGCIPVLFDPFTAY YQYSWHLPEDHGKYSVFVDQEEVRG |
Full Sequence |
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Protein Sequence Length: 580 Download |
MVGASMAKRK PKVPKQPPPK ESCSCFXFLL KFIYRAPAAV FFLFLIYLWS SSTTIISGNV 60 VHVCVSSRKL NDHYCLSAGK TQPKFEIPIP VINHSSIYLH TLDKSSNIPL PLSLPLYHGN 120 GSTSPSQPTV NGEKVRETAE VIRAESDPII MRNGENKDRE EEVVNAKKEV EEQMQLHRSW 180 ISDKKQAGCE GRGVYVYNLP SKFNFDLIGQ CRDMITWLDF CKYLKNEAMG EPIPKFGNGW 240 YQTHQHSLEP IFHQRVMKHP CRVYNEDEAK LFYIPFYGGL DILRWHFKNV SSDVKDTLSL 300 ELITWLRKQR SWTKNSGKDH VIVLGKISWD FRRKDRSWGT RFLEIDQMKN PVKLLIERQP 360 WQPNDIGIPH PTYFHPSSDE DIMAWQWKII SSHRKQLVSF AGAARPGQAK SIRSILIKQC 420 SSSSEYGNQC RFVDCSLGGC DQPEPVIELF MESEFCLQPP GDSPTRKSLF DSLISGCIPV 480 LFDPFTAYYQ YSWHLPEDHG KYSVFVDQEE VRGMKVNVFD TLKKISKEKR DDMRRFIVYE 540 LLPGLVYGDS NAKFEIFEDA FSITMTNLME RVTKLKSNV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-62 | 189 | 525 | 352 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34680.1 | 0 | 2 | 577 | 456 | 994 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_176534.2 | 0 | 32 | 574 | 68 | 662 | catalytic [Arabidopsis thaliana] |
RefSeq | XP_002269913.1 | 0 | 2 | 577 | 1 | 539 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299537.1 | 0 | 2 | 576 | 1 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509789.1 | 0 | 2 | 576 | 1 | 567 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |