y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000778598 |
Family | GT35 |
Protein Properties | Length: 434 Molecular Weight: 50087.8 Isoelectric Point: 7.849 |
Chromosome | Chromosome/Scaffold: 002924247 Start: 19018 End: 20866 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 2 | 422 | 0 |
EGKTLRLKQQYTLCSASLQDIXARFERRSGANVKWQEFPEKVAVQMNDTHPTLCIPELMRILIDLKGLDWKEAWNITQRTVAYTNHTVLPEALEKWSLEL MEKLLPRHVQILEMIDEELIQTIISEYGTADYDLIDKKLKEMRILENVDLPAKFADLIVKPKKSSIAVPSEEIEDSKEEDESADESADEENVPVKKHEEE KKKKVVVEPPKLVRMANLCVVGGHAVNGVAEIHSEIVKDEVFNSFYKLWPNKFQNKTNGVTPRRWIRFCNPDLSNIITKWIGTEDWVLDTEKLAELRKFA DDQDLQTQWREAKRNNKLKVVSLIKERTGYSVNPDAMFDIQVKRIHEYKRQLMNIMGIVYRYKKMKEMSASERKSKFVPRVCMFGGKAFATYVQAKRIVK FITDVGATVNCDPSIGDLLKV |
Full Sequence |
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Protein Sequence Length: 434 Download |
MEGKTLRLKQ QYTLCSASLQ DIXARFERRS GANVKWQEFP EKVAVQMNDT HPTLCIPELM 60 RILIDLKGLD WKEAWNITQR TVAYTNHTVL PEALEKWSLE LMEKLLPRHV QILEMIDEEL 120 IQTIISEYGT ADYDLIDKKL KEMRILENVD LPAKFADLIV KPKKSSIAVP SEEIEDSKEE 180 DESADESADE ENVPVKKHEE EKKKKVVVEP PKLVRMANLC VVGGHAVNGV AEIHSEIVKD 240 EVFNSFYKLW PNKFQNKTNG VTPRRWIRFC NPDLSNIITK WIGTEDWVLD TEKLAELRKF 300 ADDQDLQTQW REAKRNNKLK VVSLIKERTG YSVNPDAMFD IQVKRIHEYK RQLMNIMGIV 360 YRYKKMKEMS ASERKSKFVP RVCMFGGKAF ATYVQAKRIV KFITDVGATV NCDPSIGDLL 420 KVSISLVLIV SWH* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02093 | P_ylase | 2.0e-59 | 1 | 148 | 148 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd04300 | GT1_Glycogen_Phosphorylase | 1.0e-65 | 1 | 148 | 148 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 2.0e-98 | 215 | 418 | 204 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 2.0e-98 | 215 | 418 | 204 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
cd04300 | GT1_Glycogen_Phosphorylase | 8.0e-111 | 215 | 418 | 204 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ11757.1 | 0 | 1 | 422 | 302 | 743 | alpha-1,4 glucan phosphorylase [Gossypium hirsutum] |
Swiss-Prot | P27598 | 0 | 1 | 422 | 333 | 763 | PHSL_IPOBA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
Swiss-Prot | P53536 | 0 | 1 | 422 | 358 | 811 | PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
RefSeq | XP_002305367.1 | 0 | 1 | 422 | 313 | 757 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526085.1 | 0 | 1 | 422 | 350 | 785 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2azd_B | 0 | 1 | 422 | 262 | 607 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 2azd_A | 0 | 1 | 422 | 262 | 607 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 2aw3_B | 0 | 1 | 422 | 262 | 607 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 2aw3_A | 0 | 1 | 422 | 262 | 607 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 2av6_B | 0 | 1 | 422 | 262 | 607 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EB154454 | 204 | 215 | 418 | 0 |
CN911888 | 204 | 215 | 418 | 0 |
HO418036 | 420 | 2 | 418 | 0 |
EE663639 | 241 | 107 | 347 | 0 |
GR446836 | 204 | 215 | 418 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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