Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000779011 |
Family | GH10 |
Protein Properties | Length: 581 Molecular Weight: 65356.3 Isoelectric Point: 8.9799 |
Chromosome | Chromosome/Scaffold: 011163557 Start: 7427 End: 9942 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 225 | 488 | 0 |
FSSFPFGCAINKNILTNIAYQNWFTSRFRVTTFEDEMKWYSTEPSWGHEYYSVADAMLQFARKHNVAVRGHNVFWEDPQYNPGWVKSLTKQQLFTATAKR LHSVINRYRGQVIAWDVVNENLHFNFFEHILGSKASALFYNMAIRTDGATTMFMNEFNTIEDSRDGLSTPAKYLQKLREIQTFLGNRNARLGIGLESHFS MAPNLPYIRASIDTLAAARLPIWITELDVKSNPNQALYLEQILRELHAHPQIQGIIIWSAWKPQ |
Full Sequence |
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Protein Sequence Length: 581 Download |
MTILGGINLL LLLCASFFSG YEVSALSYDY TASIECLEKP HKPQYSGGIV VNPELKHGLK 60 GWSAFGNAKL QHRESQGNEF VVAHSRYEPH DSISQKIYLH RNKLYSFSAW IQVSNGSVPV 120 TAVFKTNSGF VFAGSIVAKS NCWSMLKGGL TVNSSGPAEL YFESNIASVD IWVDSISLQP 180 FTEKQWKSHQ DQSITKIRKR NVRIQALDAQ GNPLENATIS IQQKFSSFPF GCAINKNILT 240 NIAYQNWFTS RFRVTTFEDE MKWYSTEPSW GHEYYSVADA MLQFARKHNV AVRGHNVFWE 300 DPQYNPGWVK SLTKQQLFTA TAKRLHSVIN RYRGQVIAWD VVNENLHFNF FEHILGSKAS 360 ALFYNMAIRT DGATTMFMNE FNTIEDSRDG LSTPAKYLQK LREIQTFLGN RNARLGIGLE 420 SHFSMAPNLP YIRASIDTLA AARLPIWITE LDVKSNPNQA LYLEQILREL HAHPQIQGII 480 IWSAWKPQGC YRMCLTDNNF RNLATGNVVD KLLHEWGLRA GLTSSGMTDA NGFFESSLSH 540 GDYKVKITRP SAVINSSLVQ TLIVAPTTAS HQPLEIQLSV * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 0.001 | 58 | 164 | 117 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 5.0e-28 | 223 | 501 | 320 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 1.0e-45 | 220 | 482 | 285 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 9.0e-70 | 261 | 509 | 274 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN10199.1 | 0 | 9 | 557 | 13 | 560 | endoxylanase [Carica papaya] |
EMBL | CBI22450.1 | 0 | 16 | 568 | 38 | 581 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264556.1 | 0 | 25 | 568 | 109 | 644 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313180.1 | 0 | 34 | 547 | 1 | 510 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532418.1 | 0 | 20 | 578 | 15 | 566 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1tux_A | 1e-23 | 230 | 513 | 18 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1x_A | 4e-21 | 230 | 500 | 18 | 288 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1w_A | 4e-21 | 230 | 500 | 18 | 288 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1nq6_A | 6e-21 | 230 | 489 | 15 | 280 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 2bnj_A | 6e-21 | 230 | 500 | 18 | 288 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |