Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000828513 |
Family | GT47 |
Protein Properties | Length: 489 Molecular Weight: 56210.6 Isoelectric Point: 8.1081 |
Chromosome | Chromosome/Scaffold: 01604675 Start: 29577 End: 31043 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 89 | 430 | 0 |
SGRVFVYDLPKTLNQEILQNCDDLNPWSSRCKALANDGLGQKATGIEGIVPDNLVPAWYWTDQFVSEVIFHNRILNHKCRVMEPESATAFYIPFYVGLAV GKYLWSNSSTAQDRDRHCEMMLRWVQDQPSYKKSDGWDHFITMGRITWDFRRSKXXDWGSSCIYLPGMRNITRLLIERNPWDYFDVGIPYPTGFHPRSDS DVADWQNFVRNRSRSKLFSFAGGKRGAIKNDFRGLLLSHCQKESDACRVVDCAGTKCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFF WRRTAYIQYEWFLPGEPDSYSVFIDRNAVINGTASIKNVLQG |
Full Sequence |
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Protein Sequence Length: 489 Download |
MFSVSDNKFP EPQPKRPQSL DKVNSFNSIL QLIHQPRTCL LFAILALQVL LLFTLRSLPF 60 ARQHLSPTYS PQPVRLPLTV PEPEDECGSG RVFVYDLPKT LNQEILQNCD DLNPWSSRCK 120 ALANDGLGQK ATGIEGIVPD NLVPAWYWTD QFVSEVIFHN RILNHKCRVM EPESATAFYI 180 PFYVGLAVGK YLWSNSSTAQ DRDRHCEMML RWVQDQPSYK KSDGWDHFIT MGRITWDFRR 240 SKXXDWGSSC IYLPGMRNIT RLLIERNPWD YFDVGIPYPT GFHPRSDSDV ADWQNFVRNR 300 SRSKLFSFAG GKRGAIKNDF RGLLLSHCQK ESDACRVVDC AGTKCSNGTS AILETFLDSD 360 FCLQPRGDSF TRRSIFDCMV AGSIPVFFWR RTAYIQYEWF LPGEPDSYSV FIDRNAVING 420 TASIKNVLQG FSREEVKKMR EKVIDYIPKF LYAEPQEGLE TVKDAFDIAL EGVFRRFKQQ 480 GELGFRWK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-53 | 87 | 431 | 361 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201028.1 | 0 | 1 | 488 | 1 | 517 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 1 | 487 | 1 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 1 | 487 | 1 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 10 | 487 | 12 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 1 | 487 | 1 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY290373 | 374 | 97 | 469 | 0 |
DY267021 | 344 | 126 | 469 | 0 |
EX676257 | 313 | 65 | 377 | 0 |
EL434952 | 310 | 101 | 410 | 0 |
DY269151 | 300 | 157 | 456 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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