Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000843097 |
Family | CBM57 |
Protein Properties | Length: 408 Molecular Weight: 44782.7 Isoelectric Point: 5.0832 |
Chromosome | Chromosome/Scaffold: 0007271234 Start: 199 End: 1422 |
Description | hercules receptor kinase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 222 | 376 | 3.7e-22 |
YRLNVGGSEIDPGQDADLWRTWELDFSYMITANAGLEISNSSNITYSSANDTSVAPILVYETARTMSNTEVLEKRFNMSWKFEVDPDFDYLVRLHFCELT FDKANQRIFRIYINNRTAADNFNVFARAGGKNKAYHQDFFDVVSPKVDTLWIQLG |
Full Sequence |
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Protein Sequence Length: 408 Download |
MALLGREIFG LLFPVIFCAF AQSKSLLINC GTNSSITVSG RKWVGDLAPN NSITLSSPAN 60 AASTAPSSVD STASAPLYAT ARIFDGGLNY TFPGSRGNYF VRLHFCPFPF DNYNVNESRF 120 GVVANGLKLM SEFSVLGEIS RKNAYLLSSG SNVTSFLVKE YILAIKEDVL VFEFIPVKGS 180 FGFVNAIEIV PAMDTLFAGS VSKVGGNGAN QNISWQGIET MYRLNVGGSE IDPGQDADLW 240 RTWELDFSYM ITANAGLEIS NSSNITYSSA NDTSVAPILV YETARTMSNT EVLEKRFNMS 300 WKFEVDPDFD YLVRLHFCEL TFDKANQRIF RIYINNRTAA DNFNVFARAG GKNKAYHQDF 360 FDVVSPKVDT LWIQLGPDTA AGAAGTDALL NGLEIFKLSR KWESRLC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03150 | PLN03150 | 2.0e-5 | 206 | 355 | 159 | + hypothetical protein; Provisional | ||
pfam11721 | Malectin | 1.0e-6 | 24 | 135 | 113 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
pfam11721 | Malectin | 2.0e-15 | 220 | 376 | 159 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
pfam12819 | Malectin_like | 2.0e-56 | 28 | 398 | 383 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI31024.1 | 0 | 7 | 400 | 2 | 400 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264211.1 | 0 | 5 | 400 | 45 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299052.1 | 0 | 5 | 400 | 6 | 399 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330599.1 | 0 | 5 | 400 | 6 | 404 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523186.1 | 0 | 11 | 400 | 13 | 405 | kinase, putative [Ricinus communis] |
Signal Peptide | ||||
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Cleavage Site | ||||
23 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EY672455 | 260 | 97 | 354 | 0 |
DR811076 | 257 | 97 | 351 | 0 |
GW870292 | 145 | 256 | 400 | 0 |
FG495013 | 186 | 96 | 278 | 0 |
FG490030 | 178 | 96 | 270 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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