Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000845743 |
Family | CBM57 |
Protein Properties | Length: 251 Molecular Weight: 28197.7 Isoelectric Point: 9.0845 |
Chromosome | Chromosome/Scaffold: 000839478 Start: 3351 End: 4284 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 19 | 196 | 2.5e-25 |
INCGGGETTVRGNKYDQDNDTSLSYTSPKKNWAYSVSGGYGVPESNTSNYIRSMTCGVPITEAPLYEKARLSPVSLKYYAFCLRKGNYTVTLYFNEVVYT KNEDYTNLRKRVFDVYIQDVRRLNYVNIREKKGSEPITENISAVVVSDSGLLNIHFYWPGKGSYQYQPSFNGPLISAI |
Full Sequence |
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Protein Sequence Length: 251 Download |
MLQNMIYVIF FXADHSLFIN CGGGETTVRG NKYDQDNDTS LSYTSPKKNW AYSVSGGYGV 60 PESNTSNYIR SMTCGVPITE APLYEKARLS PVSLKYYAFC LRKGNYTVTL YFNEVVYTKN 120 EDYTNLRKRV FDVYIQDVRR LNYVNIREKK GSEPITENIS AVVVSDSGLL NIHFYWPGKG 180 SYQYQPSFNG PLISAISVTP EFKISSDKNN GQRVALITLA SIVAALPLSL AFAWKMGWLS 240 SEEFRSKSIS * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam11721 | Malectin | 5.0e-35 | 15 | 196 | 187 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002307891.1 | 5.60519e-45 | 16 | 204 | 31 | 219 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323152.1 | 1.4013e-45 | 39 | 249 | 9 | 225 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323341.1 | 0 | 15 | 249 | 298 | 530 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333814.1 | 0 | 2 | 244 | 7 | 257 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002338709.1 | 0 | 16 | 248 | 2 | 243 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY305959 | 239 | 16 | 250 | 0 |
CV706518 | 222 | 28 | 245 | 0 |
FC922818 | 215 | 16 | 226 | 1.4013e-45 |
FS340482 | 240 | 17 | 249 | 1e-38 |
FF379853 | 166 | 15 | 178 | 6e-38 |
Sequence Alignments (This image is cropped. Click for full image.) |
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