| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000870113 |
| Family | CE8 |
| Protein Properties | Length: 356 Molecular Weight: 38665.5 Isoelectric Point: 8.8813 |
| Chromosome | Chromosome/Scaffold: 007958145 Start: 20194 End: 21664 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 103 | 345 | 0 |
| TVGFKGCSNFSSVQNAVDAVPELSINRTLIIINSGIYREKVTVSANKTNLIIQGQGYLNTIIAWNDTANSTGGTAFSSSVAIFAPCFTAYNISFQNTAPP PAPGRIGAQAVALRIAGDQAAFYGCGFYGAQDXLNDDRGRHYFRECFIQGSIDFIFGKARSLYEGCILNSIANAVKSGISGAITAQGRQSMQEQSGFSFV NCSVGGSGTVWLGRAWGAYATVVFSKTYMSDVVASDGWNDWKD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 356 Download |
| MTTKTTLFFW LSAFAIALLS TFKCLPLTPF LSPTSIISES ARNSFKLAIF DQVFEQTGES 60 LLSTLTSIVA RHHHHRQRRH TCDQTKRKNS RFMSEYNVSL VLTVGFKGCS NFSSVQNAVD 120 AVPELSINRT LIIINSGIYR EKVTVSANKT NLIIQGQGYL NTIIAWNDTA NSTGGTAFSS 180 SVAIFAPCFT AYNISFQNTA PPPAPGRIGA QAVALRIAGD QAAFYGCGFY GAQDXLNDDR 240 GRHYFRECFI QGSIDFIFGK ARSLYEGCIL NSIANAVKSG ISGAITAQGR QSMQEQSGFS 300 FVNCSVGGSG TVWLGRAWGA YATVVFSKTY MSDVVASDGW NDWKDPSRDP SVLIA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 6.0e-75 | 99 | 352 | 255 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 8.0e-82 | 101 | 353 | 254 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 5.0e-89 | 100 | 347 | 254 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-105 | 86 | 352 | 274 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 5.0e-128 | 97 | 352 | 259 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30191.1 | 0 | 42 | 353 | 37 | 356 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_181209.1 | 0 | 86 | 352 | 75 | 341 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002264941.1 | 0 | 101 | 353 | 14 | 266 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326223.1 | 0 | 86 | 353 | 3 | 270 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519425.1 | 0 | 32 | 353 | 30 | 324 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 5e-36 | 102 | 343 | 9 | 252 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 8e-30 | 104 | 343 | 7 | 248 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 8e-16 | 112 | 336 | 44 | 285 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.000000000000002 | 112 | 333 | 18 | 258 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.000000000000002 | 112 | 333 | 18 | 258 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
