| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000936886 |
| Family | CE8 |
| Protein Properties | Length: 276 Molecular Weight: 31183.9 Isoelectric Point: 7.4617 |
| Chromosome | Chromosome/Scaffold: 001718169 Start: 22738 End: 24029 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 16 | 269 | 0 |
| EKVLVPISKPYISFIGNQXNTSETVITWNNKASDKDGTGCELGTYRTASVAIEADYFCATGITFENTVVAVPGGYGMQAVALRVAGDKAMFYRVRVLGTQ DTLLDETGSHYFYHCHIQGNVDFIFGRSRSLYQECVIQSTAENSGAIAAHHRDSPYEDTGFSFVNCKIIGTGYIYLGRAWGNYSRAVYSYCHFDDIITPP GWSDWNYPSRQKTVDFGEYKCRGRGAERSGRVPWLKSFSLEEIRPFLDTKFISG | |||
| Full Sequence |
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| Protein Sequence Length: 276 Download |
| MHYNFVVFWR TLKVIEKVLV PISKPYISFI GNQXNTSETV ITWNNKASDK DGTGCELGTY 60 RTASVAIEAD YFCATGITFE NTVVAVPGGY GMQAVALRVA GDKAMFYRVR VLGTQDTLLD 120 ETGSHYFYHC HIQGNVDFIF GRSRSLYQEC VIQSTAENSG AIAAHHRDSP YEDTGFSFVN 180 CKIIGTGYIY LGRAWGNYSR AVYSYCHFDD IITPPGWSDW NYPSRQKTVD FGEYKCRGRG 240 AERSGRVPWL KSFSLEEIRP FLDTKFISGE QWLRL* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 4.0e-86 | 15 | 273 | 262 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 1.0e-88 | 16 | 274 | 259 | + putative pectinesterase | ||
| PLN02634 | PLN02634 | 1.0e-93 | 15 | 273 | 261 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 7.0e-106 | 16 | 275 | 261 | + pectinesterase family protein | ||
| PLN02671 | PLN02671 | 6.0e-176 | 16 | 275 | 260 | + pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE67559.1 | 0 | 16 | 275 | 114 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
| RefSeq | NP_200370.1 | 0 | 16 | 275 | 121 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
| RefSeq | XP_002264297.1 | 0 | 16 | 275 | 100 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298857.1 | 0 | 16 | 275 | 59 | 318 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522727.1 | 0 | 16 | 275 | 124 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 2e-38 | 16 | 274 | 48 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 7e-30 | 59 | 274 | 79 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.00000000000008 | 5 | 260 | 61 | 359 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.0000000009 | 10 | 154 | 16 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.0000000009 | 10 | 154 | 16 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GH171677 | 253 | 24 | 276 | 0 |
| FK024268 | 215 | 62 | 276 | 0 |
| EE163480 | 239 | 39 | 276 | 0 |
| GO040593 | 230 | 46 | 275 | 0 |
| GO038045 | 236 | 40 | 275 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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