| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr1g072680.1 |
| Family | GH116 |
| Protein Properties | Length: 1104 Molecular Weight: 124353 Isoelectric Point: 7.0864 |
| Chromosome | Chromosome/Scaffold: 1 Start: 18258698 End: 18269332 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH116 | 686 | 1048 | 0 |
| GRFLYLEGVEYVMWCTYDVHFYASFALLMLFPRIELNIQRDFAQAVLCEDGRKVKFLAEGNWGTRKVYGAVPHDLGTHDPWHEMNAYNIHDTSKWKDLNP KFVLQVYRDFSATGDLQFGVDVWPAVRAAMEYMEQFDRDADGLIENDGFPDQTYDTWTVHGVSAYCGGLWLAALQAAAAMALQLGDRDFAETCKRKFLKA KPVYEQKLWNGSYFNYDSGSSSNSKSIQADQLAGQWYTASSGLPSLFDDFKIKSSLRKVFDFNVMKVKGGRMGAVNGMHPNGKVDETCMQSREIWAGVTY GVAATMILAGMEEEAFTTAEGIFLAGWSEEGSGYWFQTPEAFTIDGHYRSLIYMRPLSIWGMQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1104 Download |
| MVSGNLFHSR KNSWPTEEYI NKTTLQLFDI DNAAPPEQAW RRRLNSHANL LKEFRVTFME 60 AIKMVRLGIR MWSYVREEAS HGRKAPIDPF TRESCKPSAS QGVPLGGMGS GSISRGFRGE 120 FRQWQIIPGL CEPSPVMANQ FSVSLVFPCT IDSLYTSLIC SQIRSRQNHL WVYFPSIYED 180 YFVSWGNECS LFAEIFVSRE GGNKSFASVL APGQHEGVGA CRKADDQGIS SWGWNLNGQH 240 STYHALFPRA WTVYDGEPDP ELKISCRQIS PFIPHNYRES SLPAAVFVYT LVNTGKERAK 300 VSLLFTWANS IGGNSHLSGD HVNEPFIAED GVSGVLLYHK QVIKPYNILE VALIELRVGF 360 TTVQMVKVLH RDSIMIRFKS TLFRRFQCTL IRNPPPYMLL VVEYFRTAKD NPPVTFSIAA 420 CETQNVSVSV LPCFGLSDRS SVTAKGMWTK MVKDGQFDRE NFSSGPSMPS SPGETLCAAV 480 AASAWVEPHG KCTVAFSLAW SSPKVKFVKG STFNRRYTKF YGTSERAAVH LAHDALTHYT 540 RWEEEIAKWQ DPILKDEKLP EWYKFTLFNE LYFLVAGGTI WIDSTLLSSN KRNNSQDQLE 600 ESENAVVRIT EAKVDCRKRE VVECTTDNSY DSTAHRGHNH LDEKHNRDIS RENGTVNTLG 660 KGNSANTPHH STMKNLQHDD DNDDGGRFLY LEGVEYVMWC TYDVHFYASF ALLMLFPRIE 720 LNIQRDFAQA VLCEDGRKVK FLAEGNWGTR KVYGAVPHDL GTHDPWHEMN AYNIHDTSKW 780 KDLNPKFVLQ VYRDFSATGD LQFGVDVWPA VRAAMEYMEQ FDRDADGLIE NDGFPDQTYD 840 TWTVHGVSAY CGGLWLAALQ AAAAMALQLG DRDFAETCKR KFLKAKPVYE QKLWNGSYFN 900 YDSGSSSNSK SIQADQLAGQ WYTASSGLPS LFDDFKIKSS LRKVFDFNVM KVKGGRMGAV 960 NGMHPNGKVD ETCMQSREIW AGVTYGVAAT MILAGMEEEA FTTAEGIFLA GWSEEGSGYW 1020 FQTPEAFTID GHYRSLIYMR PLSIWGMQYA LTMPKAVLEA PKINFMDRIH LSPVSGGLHK 1080 ETGVKKIATK TKCFSSSVFN CAC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 1.0e-9 | 496 | 583 | 88 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 2.0e-10 | 225 | 312 | 89 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 4.0e-35 | 102 | 345 | 251 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 5.0e-63 | 682 | 1051 | 391 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 3.0e-146 | 686 | 1049 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN61187.1 | 0 | 406 | 1103 | 171 | 900 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_189060.2 | 0 | 1 | 1103 | 1 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 1 | 340 | 1 | 285 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002285674.1 | 0 | 401 | 1103 | 280 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 409 | 1103 | 279 | 966 | predicted protein [Populus trichocarpa] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 828 | 1104 | 0 |
| HO779860 | 156 | 674 | 829 | 0 |
| HO779860 | 102 | 537 | 638 | 0 |
| GT051521 | 331 | 738 | 1068 | 0 |
| GT045992 | 337 | 752 | 1088 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
