| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr1g072720.1 |
| Family | GH116 |
| Protein Properties | Length: 993 Molecular Weight: 111239 Isoelectric Point: 6.8683 |
| Chromosome | Chromosome/Scaffold: 1 Start: 18287993 End: 18298627 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH116 | 575 | 937 | 0 |
| GRFLYLEGVEYVMWCTYDVHFYASFALLMLFPRIELNIQRDFAQAVLCEDGRKVKFLAEGNWGTRKVYGAVPHDLGTHDPWHEMNAYNIHDTSKWKDLNP KFVLQVYRDFSATGDLQFGVDVWPAVRAAMEYMEQFDRDADGLIENDGFPDQTYDTWTVHGVSAYCGGLWLAALQAAAAMALQLGDRDFAETCKRKFLKA KPVYEQKLWNGSYFNYDSGSSSNSKSIQADQLAGQWYTASSGLPSLFDDFKIKSSLRKVFDFNVMKVKGGRMGAVNGMHPNGKVDETCMQSREIWAGVTY GVAATMILAGMEEEAFTTAEGIFLAGWSEEGSGYWFQTPEAFTIDGHYRSLIYMRPLSIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 993 Download |
| MVSGNLFHSR KNSWPTEEYI NKTTLQLFDI DNAAPPEQAW RRRLNSHANL LKEFRVTFME 60 AIKMVRLGIR MWSYVREEAS HGRKAPIDPF TRESCKPSAS QGVPLGGMGS GSISRGFRGE 120 FRQWQIIPGL CEPSPVMANQ FSIFVSREGG NKSFASVLAP GQHEGVGACR KADDQGISSW 180 GWNLNGQHST YHALFPRAWT VYDGEPDPEL KISCRQISPF IPHNYRESSL PAAVFVYTLV 240 NTGKERAKVS LLFTWANSIG GNSHLSGDHV NEPFIAEDGV SGVLLYHKQV VEYFRTAKDN 300 PPVTFSIAAC ETQNVSVSVL PCFGLSDRSS VTAKGMWTKM VKDGQFDREN FSSGPSMPSS 360 PGETLCAAVA ASAWVEPHGK CTVAFSLAWS SPKVKFVKGS TFNRRYTKFY GTSERAAVHL 420 AHDALTHYTR WEEEIAKWQD PILKDEKLPE WYKFTLFNEL YFLVAGGTIW IDSTLLSSNK 480 RNNSQDQLEE SENAVVRITE AKVDCRKREV VECTTDNSYD STAHRGHNHL DEKHNRDISR 540 ENGTVNTLGK GNSANTPHHS TMKNLQHDDD NDDGGRFLYL EGVEYVMWCT YDVHFYASFA 600 LLMLFPRIEL NIQRDFAQAV LCEDGRKVKF LAEGNWGTRK VYGAVPHDLG THDPWHEMNA 660 YNIHDTSKWK DLNPKFVLQV YRDFSATGDL QFGVDVWPAV RAAMEYMEQF DRDADGLIEN 720 DGFPDQTYDT WTVHGVSAYC GGLWLAALQA AAAMALQLGD RDFAETCKRK FLKAKPVYEQ 780 KLWNGSYFNY DSGSSSNSKS IQADQLAGQW YTASSGLPSL FDDFKIKSSL RKVFDFNVMK 840 VKGGRMGAVN GMHPNGKVDE TCMQSREIWA GVTYGVAATM ILAGMEEEAF TTAEGIFLAG 900 WSEEGSGYWF QTPEAFTIDG HYRSLIYMRP LSIWGMQYAL TMPKAVLEAP KINFMDRIHL 960 SPVSGGLHKE TGVKKIATKT KCFSSSVFNC AC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.007 | 643 | 733 | 102 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 7.0e-26 | 102 | 472 | 375 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 2.0e-60 | 102 | 431 | 338 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 3.0e-63 | 571 | 940 | 391 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 5.0e-147 | 575 | 938 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC67156.1 | 0 | 1 | 992 | 1 | 974 | hypothetical protein OsI_34005 [Oryza sativa Indica Group] |
| RefSeq | NP_189060.2 | 0 | 1 | 992 | 1 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 1 | 992 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 1 | 992 | 1 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 1 | 992 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 717 | 993 | 0 |
| HO779860 | 156 | 563 | 718 | 0 |
| HO779860 | 102 | 426 | 527 | 0 |
| GT051521 | 331 | 627 | 957 | 0 |
| GT045437 | 328 | 117 | 444 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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