| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr1g075650.1 |
| Family | AA3 |
| Protein Properties | Length: 577 Molecular Weight: 63165.9 Isoelectric Point: 4.8745 |
| Chromosome | Chromosome/Scaffold: 1 Start: 19250561 End: 19252974 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 103 | 570 | 9.99995e-41 |
| SNILKVKCDVVIVGSGCGGGVAAAVLASSGLKIFLLEGSSLNELYEQGGTFATSDGKIVLLAGSTIGGGSAVNWSASIKTPDYVLTDWSENHNLPLFSSQ EYLYAMDTVCERISVTDTCVVEGLQNQVLRKGCNELGLQVDYVPRNSSEHHYCGTDVTWLVDAVEHGAVILTRCKAEKFILENNKEGCVRRKKCLGVMAK ATISSCGALSTPPLMISSGLKNKNIGRHLHLHPVLMTWGHFPDTMSDLKGKSYEGGIITSVHKVLSDDDSKVRAIIETPSLGPGAFSTMIPWESGFDFKE RMLRYSRTVHFITIIQDKGCGEVKSEGRINYELDEEFDKENMKHGLQRALRILIAAGAVEVGTHRSDGQRIVCSGTNEMELNKFVESVYAAEGPMSHQET WNMYASAHQMGSCRIGITDKEGTVDENGQNWEAEGLFVCDASLFPTAIGINPMITIQSIAYCVAKRIA | |||
| Full Sequence |
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| Protein Sequence Length: 577 Download |
| MDGFQPKICD FVIFESLAPM NTSNLGLLFF FLGELMFLFY DENGENQAWE AIGYHVDNDE 60 STSNIQKERP LEKGIVEAMN EDDLSLAQSL SNKGLEIDID ANSNILKVKC DVVIVGSGCG 120 GGVAAAVLAS SGLKIFLLEG SSLNELYEQG GTFATSDGKI VLLAGSTIGG GSAVNWSASI 180 KTPDYVLTDW SENHNLPLFS SQEYLYAMDT VCERISVTDT CVVEGLQNQV LRKGCNELGL 240 QVDYVPRNSS EHHYCGTDVT WLVDAVEHGA VILTRCKAEK FILENNKEGC VRRKKCLGVM 300 AKATISSCGA LSTPPLMISS GLKNKNIGRH LHLHPVLMTW GHFPDTMSDL KGKSYEGGII 360 TSVHKVLSDD DSKVRAIIET PSLGPGAFST MIPWESGFDF KERMLRYSRT VHFITIIQDK 420 GCGEVKSEGR INYELDEEFD KENMKHGLQR ALRILIAAGA VEVGTHRSDG QRIVCSGTNE 480 MELNKFVESV YAAEGPMSHQ ETWNMYASAH QMGSCRIGIT DKEGTVDENG QNWEAEGLFV 540 CDASLFPTAI GINPMITIQS IAYCVAKRIA LILRMK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 0.004 | 510 | 573 | 68 | + choline dehydrogenase; Validated | ||
| COG2303 | BetA | 2.0e-14 | 136 | 570 | 504 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 2.0e-19 | 430 | 563 | 134 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| pfam00732 | GMC_oxred_N | 1.0e-70 | 145 | 336 | 222 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71289.1 | 0 | 17 | 570 | 140 | 732 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15762.1 | 0 | 27 | 574 | 150 | 745 | long chain fatty alcohol oxidase FAO1 [Lotus japonicus] |
| RefSeq | XP_002285334.1 | 0 | 17 | 570 | 140 | 732 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314488.1 | 0 | 35 | 570 | 132 | 710 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528823.1 | 0 | 27 | 576 | 148 | 745 | disulfide oxidoreductase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2gew_A | 0.01 | 510 | 569 | 442 | 496 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Asn |
| PDB | 1n4w_A | 0.01 | 510 | 569 | 442 | 496 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Asn |
| PDB | 1n4v_A | 0.01 | 510 | 569 | 442 | 496 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Asn |
| PDB | 1n4u_A | 0.01 | 510 | 569 | 442 | 496 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Asn |
| PDB | 1n1p_A | 0.01 | 510 | 569 | 442 | 496 | A Chain A, Apo Form Of A Mutant Of Glycogenin In Which Asp159 Is Replaced By Asn |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO794753 | 579 | 41 | 577 | 0 |
| HO779224 | 458 | 80 | 495 | 0 |
| HO811216 | 323 | 265 | 570 | 0 |
| DC883850 | 465 | 143 | 576 | 0 |
| HO825631 | 299 | 292 | 575 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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