y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g082210.1 |
Family | CE10 |
Protein Properties | Length: 346 Molecular Weight: 38866.3 Isoelectric Point: 6.8524 |
Chromosome | Chromosome/Scaffold: 1 Start: 21059398 End: 21061324 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 52 | 329 | 0 |
KVPANANPVDGVFSFDVIVDRETNLLTRIYRPVEGEEQHVNIVDLEKPVTAEVLPVVMFFHGGSFAHSSANSAIYDTLCRRLVGICNAVVVSVNYRRAPE NRYPCAYEDGWKAVKWVNSRTWLQSKKDSKVHIYMVGDSSGGNIVHHVALKALDSGIPVLGNILLNPLFGGEERTESEKRLDGRYFVRVKDRDWYWRAFL PEGEDRDHHACNPFGPKGRSLEGVAFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQNVKLLFLEQATVGFYLLPNNEHF |
Full Sequence |
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Protein Sequence Length: 346 Download |
MAGSNQLNPN DSKMVVPLNM WVLISNFKLA YNLLRRPDGT FNRDLAEFLD RKVPANANPV 60 DGVFSFDVIV DRETNLLTRI YRPVEGEEQH VNIVDLEKPV TAEVLPVVMF FHGGSFAHSS 120 ANSAIYDTLC RRLVGICNAV VVSVNYRRAP ENRYPCAYED GWKAVKWVNS RTWLQSKKDS 180 KVHIYMVGDS SGGNIVHHVA LKALDSGIPV LGNILLNPLF GGEERTESEK RLDGRYFVRV 240 KDRDWYWRAF LPEGEDRDHH ACNPFGPKGR SLEGVAFPKS LVVVAGLDLV QDWQLGYAKG 300 LEKAGQNVKL LFLEQATVGF YLLPNNEHFS VVMDEIKHFV NSDCS* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 0.0002 | 90 | 147 | 61 | + Carboxylesterase family. | ||
COG2272 | PnbA | 1.0e-5 | 91 | 147 | 57 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 5.0e-7 | 76 | 257 | 187 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 3.0e-32 | 17 | 327 | 315 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 8.0e-67 | 108 | 322 | 216 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN86360.1 | 0 | 1 | 344 | 1 | 344 | GID1-5 [Gossypium hirsutum] |
EMBL | CAP64324.1 | 0 | 1 | 345 | 1 | 345 | TPA: putative GID1-like gibberellin receptor [Medicago truncatula] |
RefSeq | XP_002319576.1 | 0 | 1 | 344 | 1 | 344 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328407.1 | 0 | 1 | 344 | 1 | 344 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512310.1 | 0 | 1 | 344 | 1 | 344 | Gibberellin receptor GID1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 1 | 343 | 8 | 351 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 2zsh_A | 0 | 1 | 343 | 8 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 0 | 2 | 343 | 1 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 0 | 2 | 343 | 1 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 0 | 2 | 343 | 1 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795605 | 343 | 2 | 344 | 0 |
ES790010 | 343 | 1 | 343 | 0 |
HO779605 | 345 | 1 | 344 | 0 |
DT574934 | 322 | 19 | 339 | 0 |
EV240117 | 306 | 39 | 344 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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