Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g085320.1 |
Family | GH5 |
Protein Properties | Length: 561 Molecular Weight: 63346.2 Isoelectric Point: 7.4778 |
Chromosome | Chromosome/Scaffold: 1 Start: 22546460 End: 22550522 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 42 | 351 | 7.4e-32 |
NGKTHYVNGFNSHWLMIMAADLSTRPKVTSAFQQASQHGLNVGRTWAFNDGGYKALQISPGFYDETVFQGLDFVISEASKYGVKLILSLANNWNNFGGKN KYVQWAREHGHNIKNDDDFFTHPLVKPYYQNHVKVVLTRKNTISGVLVLYKDDPTIFAWELMNEPRVHDFGKSIQNWISEMVPYVKSLDGNHLLEIGLEG FYGETIDFISNTQIPEIDFATIHLYPDSWLRHSDEAAKGVFFDKWIGAHIQDANTILVKPIIVQEFGTFSRLPGYRTDQRDSYFNKIYSAISTSAISGGS CAGGIFWQLM |
Full Sequence |
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Protein Sequence Length: 561 Download |
MGFQILVWTF LVTLAVIQHG NTQKVNVGVG FVQRKGIHFL MNGKTHYVNG FNSHWLMIMA 60 ADLSTRPKVT SAFQQASQHG LNVGRTWAFN DGGYKALQIS PGFYDETVFQ GLDFVISEAS 120 KYGVKLILSL ANNWNNFGGK NKYVQWAREH GHNIKNDDDF FTHPLVKPYY QNHVKVVLTR 180 KNTISGVLVL YKDDPTIFAW ELMNEPRVHD FGKSIQNWIS EMVPYVKSLD GNHLLEIGLE 240 GFYGETIDFI SNTQIPEIDF ATIHLYPDSW LRHSDEAAKG VFFDKWIGAH IQDANTILVK 300 PIIVQEFGTF SRLPGYRTDQ RDSYFNKIYS AISTSAISGG SCAGGIFWQL MSQGMDGYGD 360 GYEVVLKNNP STAEVIRQQS LKMSNINWAV YIADSDVHVL DCVTSISHWT TSGIAETTSC 420 WSMFAEGGEY VIASSRWSSR KRVSTDSESY YSCLFKRIVI LGFGSIIHSM EAIVEYSPDK 480 SQNMVFMGDL TKHTPITKTA FTLSVCGFPP FACFWSKDEN LVHRWFGIST VVPTYIRFYT 540 QQCFVAHAFK KKLCLCFQVV * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1009 | NuoL | 2.0e-8 | 454 | 519 | 69 | + NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism] | ||
PRK06590 | PRK06590 | 6.0e-9 | 455 | 519 | 68 | + NADH:ubiquinone oxidoreductase subunit L; Reviewed | ||
PRK07376 | PRK07376 | 4.0e-18 | 455 | 521 | 70 | + NAD(P)H-quinone oxidoreductase subunit F; Validated | ||
COG3934 | COG3934 | 5.0e-22 | 71 | 326 | 272 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
CHL00025 | ndhF | 2.0e-34 | 449 | 528 | 96 | + NADH dehydrogenase subunit 5 |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0008137 | NADH dehydrogenase (ubiquinone) activity |
GO:0042773 | ATP synthesis coupled electron transport |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF69949.1 | 0 | 27 | 383 | 21 | 390 | (1-4)-beta-mannan endohydrolase (mannan endo-1,4-beta-mannosidase), putative [Musa acuminata] |
GenBank | ABG88068.1 | 0 | 5 | 386 | 11 | 409 | endo-1,4-beta-mannanase [Glycine max] |
EMBL | CAC08442.1 | 0 | 32 | 386 | 45 | 415 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
RefSeq | XP_002281804.1 | 0 | 9 | 383 | 7 | 395 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002515142.1 | 0 | 6 | 386 | 12 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 31 | 386 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 8.99998e-41 | 30 | 378 | 13 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 8.99998e-41 | 30 | 378 | 13 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 8.99998e-41 | 30 | 378 | 13 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 8.99998e-41 | 30 | 378 | 13 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |