Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr1g088020.1 |
Family | CE8 |
Protein Properties | Length: 557 Molecular Weight: 61314.8 Isoelectric Point: 8.2406 |
Chromosome | Chromosome/Scaffold: 1 Start: 23797360 End: 23799228 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 243 | 539 | 0 |
VVVSQDGSGNFTAINDAVAAAPNNTVASDGYFFIFITKGVYQEYVSIPKNKKYLMMVGEGINQTVITGDHNVVDGFTTFNSATFAVVGQGFVAVNITFRN TAGPSKHQAVALRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNGAVVLQNCNIYPRLPLSGQFNSITAQGRTDPNQNTGTSIQNAT IKAADDLAPKVGTVQTYLGRPWKEYSRTVFMQSFMDSFINPAGWHEWNGDFALNTLYYAEYSNRGAGSSTVNRVTWPGYHVIGATDAANFTVSNFLS |
Full Sequence |
---|
Protein Sequence Length: 557 Download |
MAFKHRSIAY LLSILIFVSL HVANGIPPET ICGSTVNPTY CKNILANQNG NIYDYGRISI 60 RKSLSQSRKF MNSIDSHLQG GSSLSQSTIR ALEDCRFLAE LSFEYLSNTY TTTNQSSNVL 120 PTSQAEDFET FLSAVLTNQQ TCLEGLNTIA SDQRVKNDLL SSLSDDMKLH SVTLALFKKG 180 WVPKNKIRTS WPQNGKHLNF KNGRLPLKMS NKARAIYDSA RRNGRKLLQT NTNEDSVVVS 240 DVVVVSQDGS GNFTAINDAV AAAPNNTVAS DGYFFIFITK GVYQEYVSIP KNKKYLMMVG 300 EGINQTVITG DHNVVDGFTT FNSATFAVVG QGFVAVNITF RNTAGPSKHQ AVALRSGADM 360 STFYSCSFEG YQDTLYTHSL RQFYRECDIY GTVDFIFGNG AVVLQNCNIY PRLPLSGQFN 420 SITAQGRTDP NQNTGTSIQN ATIKAADDLA PKVGTVQTYL GRPWKEYSRT VFMQSFMDSF 480 INPAGWHEWN GDFALNTLYY AEYSNRGAGS STVNRVTWPG YHVIGATDAA NFTVSNFLSG 540 DDWIPQTGVP YSSGLI* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 2.0e-151 | 31 | 555 | 529 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 8.0e-156 | 91 | 555 | 466 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 1 | 556 | 569 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 27 | 556 | 544 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 247 | 541 | 296 | + Pectinesterase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42040.1 | 0 | 8 | 556 | 17 | 564 | pectin methylesterase 3 [Pyrus communis] |
RefSeq | XP_002268492.1 | 0 | 29 | 555 | 33 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302726.1 | 0 | 1 | 556 | 1 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320332.1 | 0 | 23 | 556 | 31 | 560 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523112.1 | 0 | 17 | 556 | 24 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 235 | 555 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 244 | 555 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 8e-25 | 242 | 545 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 8e-25 | 242 | 545 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 8e-25 | 242 | 545 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |