Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g088190.1 |
Family | GH9 |
Protein Properties | Length: 486 Molecular Weight: 54342 Isoelectric Point: 9.4754 |
Chromosome | Chromosome/Scaffold: 1 Start: 23882398 End: 23884544 |
Description | glycosyl hydrolase 9B13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 39 | 476 | 0 |
NYRDALTKSILFFEGQRSGKLPSNQRIFCWYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELPNAREAIRWATDYLLKATAHPNTIYVQVGDAKKD HACWERPEDMDTPRSVFKIDANAPGSEVAAETAAALAAASLVFRRTDPTYSKILVRRAIRVFQFADQHRGPYSNVLKPFVCPFYWDYSGYQDELLWGAAW LHKATKNPMYLNYIQVNGQILGAAEFDNTFGWDNKHVGARILLSKEFLVQRVRSLHDYKGHSDNFVCSLIPGAGSSSAQYTPGGLLFKMSDSNMQYVTST SFLLVAYAKYLTKSHSVVRCGGTIVTPKRLRTLAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSMAVHPGKIQCSAGFSVMSSQSPNPNILV GAVVGGPDQHDRFPDKRSDYEQSEPATYVNAPLVGTLA |
Full Sequence |
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Protein Sequence Length: 486 Download |
MTLSLSFSFL FLLSLFSSFL LHTHAFPLHR HHPHFATHNY RDALTKSILF FEGQRSGKLP 60 SNQRIFCWYY DAGDNVKFGF PMAFTTTMLS WSVIEFGGLM KGELPNAREA IRWATDYLLK 120 ATAHPNTIYV QVGDAKKDHA CWERPEDMDT PRSVFKIDAN APGSEVAAET AAALAAASLV 180 FRRTDPTYSK ILVRRAIRVF QFADQHRGPY SNVLKPFVCP FYWDYSGYQD ELLWGAAWLH 240 KATKNPMYLN YIQVNGQILG AAEFDNTFGW DNKHVGARIL LSKEFLVQRV RSLHDYKGHS 300 DNFVCSLIPG AGSSSAQYTP GGLLFKMSDS NMQYVTSTSF LLVAYAKYLT KSHSVVRCGG 360 TIVTPKRLRT LAKKQVDYLL GDNPLKMSYM VGYGPRYPQR IHHRGSSLPS MAVHPGKIQC 420 SAGFSVMSSQ SPNPNILVGA VVGGPDQHDR FPDKRSDYEQ SEPATYVNAP LVGTLAYLAH 480 SFGQL* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02266 | PLN02266 | 0 | 22 | 485 | 484 | + endoglucanase |
PLN02308 | PLN02308 | 0 | 36 | 481 | 466 | + endoglucanase |
pfam00759 | Glyco_hydro_9 | 0 | 39 | 476 | 464 | + Glycosyl hydrolase family 9. |
PLN03009 | PLN03009 | 0 | 36 | 479 | 466 | + cellulase |
PLN02613 | PLN02613 | 0 | 39 | 478 | 463 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA85150.1 | 0 | 22 | 485 | 21 | 506 | endo-1,4-beta-glucanase [Pisum sativum] |
RefSeq | XP_002271736.1 | 0 | 15 | 485 | 24 | 511 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301487.1 | 0 | 4 | 485 | 5 | 511 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002320998.1 | 0 | 1 | 485 | 1 | 510 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523114.1 | 0 | 33 | 485 | 40 | 510 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 38 | 478 | 3 | 428 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1ksc_A | 0 | 38 | 478 | 3 | 428 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1ks8_A | 0 | 38 | 478 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 39 | 483 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 39 | 483 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |