Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g101770.1 |
Family | AA3 |
Protein Properties | Length: 564 Molecular Weight: 62300.9 Isoelectric Point: 8.8925 |
Chromosome | Chromosome/Scaffold: 1 Start: 30118675 End: 30121450 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 38 | 560 | 0 |
TFAPPILTYDYIVIGGGTCGCPLAATLSQGGKVLVLERGGSPYTNPEQINIHNFVNALFNISPSSFSQVFISTDGVYNTRARVLGGGSVVGAGFYSRASY KYIREFGWNETLARSSYEWVEKKVVFEPSMLQWQSAVRDGLLEAGILPYNGFTFDHVYGTKVGGTIFDKEGHKHTAADLLEYADPKRISVYLHATVQKIL FKWNAEKGRPQAYGVIFKDTLGIIHRAYIISKVDNEIIVSAGAIGSPQLLMLSGIGPANHLKALGIQVVMDQPFVGQGMADSPKNVLVVPSPLPVELSVI ETVGITKFGSFIQALSGLSFGYSFSDKLRGIFELLSNQSGISSKFRPETMESFADIIRSLTNPIFKFKGGMIVEKVMGPRSTGHLELLTTNPNDNPSVTF NYFKDPEDLRMCVEGMKTIINVINSKAFSRFRYKNMPIQALIDLMLLLPVNLRPKHPNAAFSLEQYCIDTVSTIWHYHGGCQSGKVVDHNYKVIGVEALR VIDGSTFYRTPGTNPQATIMMIG |
Full Sequence |
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Protein Sequence Length: 564 Download |
MDWFLAQFIW VILAGSLLFN ALSYSYKAPM YTFIKEATFA PPILTYDYIV IGGGTCGCPL 60 AATLSQGGKV LVLERGGSPY TNPEQINIHN FVNALFNISP SSFSQVFIST DGVYNTRARV 120 LGGGSVVGAG FYSRASYKYI REFGWNETLA RSSYEWVEKK VVFEPSMLQW QSAVRDGLLE 180 AGILPYNGFT FDHVYGTKVG GTIFDKEGHK HTAADLLEYA DPKRISVYLH ATVQKILFKW 240 NAEKGRPQAY GVIFKDTLGI IHRAYIISKV DNEIIVSAGA IGSPQLLMLS GIGPANHLKA 300 LGIQVVMDQP FVGQGMADSP KNVLVVPSPL PVELSVIETV GITKFGSFIQ ALSGLSFGYS 360 FSDKLRGIFE LLSNQSGISS KFRPETMESF ADIIRSLTNP IFKFKGGMIV EKVMGPRSTG 420 HLELLTTNPN DNPSVTFNYF KDPEDLRMCV EGMKTIINVI NSKAFSRFRY KNMPIQALID 480 LMLLLPVNLR PKHPNAAFSL EQYCIDTVST IWHYHGGCQS GKVVDHNYKV IGVEALRVID 540 GSTFYRTPGT NPQATIMMIG RYH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 8.0e-13 | 414 | 560 | 157 | + choline dehydrogenase; Validated | ||
PRK02106 | PRK02106 | 2.0e-20 | 206 | 318 | 117 | + choline dehydrogenase; Validated | ||
pfam05199 | GMC_oxred_C | 2.0e-25 | 416 | 560 | 153 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 9.0e-40 | 44 | 561 | 572 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 4 | 562 | 573 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI31862.1 | 0 | 13 | 562 | 13 | 528 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200008.1 | 0 | 7 | 562 | 4 | 567 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
RefSeq | XP_002267807.1 | 0 | 11 | 562 | 11 | 550 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002267848.1 | 0 | 13 | 562 | 13 | 550 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002510860.1 | 0 | 7 | 562 | 7 | 561 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 45 | 562 | 26 | 509 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 45 | 562 | 26 | 509 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 45 | 562 | 26 | 509 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 45 | 562 | 26 | 509 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 45 | 562 | 26 | 509 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |