| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr1g102230.1 |
| Family | GH29 |
| Protein Properties | Length: 491 Molecular Weight: 56135.5 Isoelectric Point: 6.6774 |
| Chromosome | Chromosome/Scaffold: 1 Start: 30393719 End: 30396532 |
| Description | alpha-L-fucosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH29 | 42 | 340 | 0 |
| SQLKWQQREIIMFLHFGVNTFSDSEWGTGDENPSIFNPIGLNTTQWANVAAESGISLMILTAKHHDGFCLWPSKYTKHSVISSKWQNGKGDVVKEFVNAA TDKGIDVGIYLSPWDRHDSRYGHDLLYNEYYLAQLQELLKKYQDVREIWFDGAKDPRAQNVTYYFSDWFSMVKELQSSINIFSDAGPDVRWVGDETGTAG DTCWSTINRTSLSIGASNITQYLNTGDPKGTDWLPAECDVSIRPGWFWHKSESPKKLSDLLDIYYKSVGRNCVLLLNVPPNTTGLISENDAHRLKEFRS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 491 Download |
| MARLWCSFFL FTLLFQLNNF CISMVEQVPS PPLPILPLPT YSQLKWQQRE IIMFLHFGVN 60 TFSDSEWGTG DENPSIFNPI GLNTTQWANV AAESGISLMI LTAKHHDGFC LWPSKYTKHS 120 VISSKWQNGK GDVVKEFVNA ATDKGIDVGI YLSPWDRHDS RYGHDLLYNE YYLAQLQELL 180 KKYQDVREIW FDGAKDPRAQ NVTYYFSDWF SMVKELQSSI NIFSDAGPDV RWVGDETGTA 240 GDTCWSTINR TSLSIGASNI TQYLNTGDPK GTDWLPAECD VSIRPGWFWH KSESPKKLSD 300 LLDIYYKSVG RNCVLLLNVP PNTTGLISEN DAHRLKEFRS AIDTIFHKNI AENRYVKVSS 360 QRGGKEGGFG PENMLDSDHL WSYWTPREDD KEKDHWIEIW GNDGSLRFNV IRIQEAIGLG 420 QRIERYEIYV DGKSIIQGTT IGYKRLHRLD GDVVHARVVR IRFIKARGVP LISSIGLHFD 480 PFWHSRFTAA * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00812 | Alpha_L_fucos | 5.0e-26 | 53 | 338 | 331 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
| pfam01120 | Alpha_L_fucos | 4.0e-27 | 53 | 338 | 320 | + Alpha-L-fucosidase. | ||
| COG3669 | COG3669 | 4.0e-54 | 43 | 477 | 449 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004560 | alpha-L-fucosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002270630.1 | 0 | 42 | 484 | 22 | 461 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002270674.1 | 0 | 24 | 490 | 1 | 466 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318264.1 | 0 | 1 | 488 | 1 | 485 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322431.1 | 0 | 1 | 484 | 1 | 482 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510887.1 | 0 | 1 | 484 | 1 | 482 | alpha-l-fucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3eyp_B | 0 | 34 | 478 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3eyp_A | 0 | 34 | 478 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3mo4_B | 0 | 39 | 473 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3mo4_A | 0 | 39 | 473 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3ues_B | 0 | 39 | 473 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
