CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr1g104880.1
FamilyGT4
Protein PropertiesLength: 419 Molecular Weight: 46756.9 Isoelectric Point: 7.5531
ChromosomeChromosome/Scaffold: 1 Start: 30909838 End: 30913046
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42173864.4e-39
  TSTKPNFLSINRFERKKNIQLAISAFAMLYSPNRVLKHQAITNASLTVAGGFDKRLKENVEYLEELKDLAEKEGVSDKIKFVTSCSTDERNALLSECLCV
  LYTPENEHFGIVPLEAMAAYKVVIACNSGGPVESIKNGVTGFLCSPTPQEFSSAMANLINDPQEAEKMGN
Full Sequence
Protein Sequence     Length: 419     Download
MAAKETNSKM NIAIIHPDLG IGGAERLVVD AAVELASRGH KVHIFTAHHD KNRCFEETIA    60
GESISVSVYL GIFPVTVYGS FLPRHIFYRL HALCAYLRCL FVAFCVLFLW PSFDVILADQ    120
VSVVIPILKL KRSTKVVFYC HFPDLLLAQH STFLRRIYRK PIDYLEEITT GMADSILVNS    180
NFTASTFANT FKHLDAKGIR PAVLYPAVNV DQFNEPTSTK PNFLSINRFE RKKNIQLAIS    240
AFAMLYSPNR VLKHQAITNA SLTVAGGFDK RLKENVEYLE ELKDLAEKEG VSDKIKFVTS    300
CSTDERNALL SECLCVLYTP ENEHFGIVPL EAMAAYKVVI ACNSGGPVES IKNGVTGFLC    360
SPTPQEFSSA MANLINDPQE AEKMGNEARR HVVESFSTKT FGTHLNRYLI DIYRGKED*     420
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG0438RfaG2.0e-379416412+
cd03798GT1_wlbH_like1.0e-3712414425+
cd03811GT1_WabH_like8.0e-3911397401+
cd03801GT1_YqgM_like2.0e-4811397402+
cd03805GT1_ALG2_like010405409+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAC83030.1034182405Similar to gene pi010 glycosyltransferase gi
GenBankAAM26674.1034182403At1g78800/F9K20_16 [Arabidopsis thaliana]
GenBankACU21459.1034182407unknown [Glycine max]
RefSeqNP_178001.2034182403glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqXP_002525620.1044183408alpha-1,3-mannosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2f9f_A0.0000000000000622338326168A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a
PDB3c4v_B0.0000000004173406165399A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a
PDB3c4v_A0.0000000004173406165399A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a
PDB3c4q_B0.0000000004173406165399A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp
PDB3c4q_A0.0000000004173406165399A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp
Transmembrane Domains
StartEnd
96118
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CK27432532373270
EL44718732343260
EL45605233033310
GO87472534693510
EV263639249733210
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_021_00182.1Aquca_021_00182.2Aquca_021_00182.3
Arabidopsis lyrata477043
Arabidopsis thalianaAT1G78800.1
Brachypodium distachyonBradi5g19840.1
Brassica rapaBra035064
Carica papayaevm.model.supercontig_77.17
Capsella rubellaCarubv10022022m
Chlamydomonas reinhardtiig1920.t1
Citrus clementinaCiclev10022599mCiclev10020399m
Citrus sinensisorange1.1g036860m
Cucumis sativusCucsa.220170.2Cucsa.273740.2Cucsa.273740.1Cucsa.220170.1
Eucalyptus grandisEucgr.F01245.1
Fragaria vescamrna27271.1-v1.0-hybrid
Glycine maxGlyma12g35950.2Glyma12g35950.1Glyma13g34430.1Glyma13g34430.2
Gossypium raimondiiGorai.002G054000.2Gorai.002G054000.1
Linum usitatissimumLus10037008Lus10015797
Malus domesticaMDP0000319369MDP0000185482
Manihot esculentacassava4.1_008785m
Mimulus guttatusmgv1a007424m
Oryza sativaLOC_Os04g49960.1
Panicum virgatumPavirv00018845mPavirv00056995mPavirv00050038mPavirv00004378m
Physcomitrella patensPp1s246_77V6.1
Phaseolus vulgarisPhvul.005G081600.1
Picea abiesMA_499839g0010
Populus trichocarpaPotri.011G109000.1
Prunus persicappa006490mppa006502m
Ricinus communis29681.m001322
Setaria italicaSi017356mSi013830mSi010219m
Selaginella moellendorffii419620
Sorghum bicolorSb06g026860.1
Thellungiella halophilaThhalv10019736mThhalv10007837m
Vitis viniferaGSVIVT01014186001
Volvox carteriVocar20014584m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny