Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g106910.1 |
Family | GH10 |
Protein Properties | Length: 581 Molecular Weight: 65467.9 Isoelectric Point: 6.8526 |
Chromosome | Chromosome/Scaffold: 1 Start: 31504131 End: 31507118 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 229 | 493 | 0 |
TRANFPYGCAMNRHILTNSDYQKWFVSRFKYTTFTNEMKWYSTEKIQGHENYTIPDAMLKFAKENGISVRGHNILWDSERRQPEWDLSLSPDELREAAAK RMKSVVSRYKGQLIAWDVVNENVHFHFFEDNLGKNASAVYYSAAYHLDPTTNMFMNEYNTIEYSGDKDASPTNYIRKLKEIQQFPGNAGISLAIGLQCHF SSGVPNIAYMRSGLDLLAATGLPIWLTETSVDPQPNQAEYFEEILREGYSHPAVQGIVMFVGPAQ |
Full Sequence |
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Protein Sequence Length: 581 Download |
MKVGAAELCI LLFTTSCLLH FSSELQHSMP YDYSATTQCV TEPKRAQYGG GIIVNPGFDH 60 NIKGWRVFGN GTIEERISND ENRFIVASNR RQTLDGFSQK VQLKKGMIYM FSAWFQLSEG 120 SDIVSVVFKR NGSELVHGGH VIAKHGCWSL LKGGIVANFS SPAEILFESE NPIVELWVHS 180 VSLQPFTREQ WRSHQDSSIE RVRKSRVRFQ VTHPNETVLE GATVVIKQTR ANFPYGCAMN 240 RHILTNSDYQ KWFVSRFKYT TFTNEMKWYS TEKIQGHENY TIPDAMLKFA KENGISVRGH 300 NILWDSERRQ PEWDLSLSPD ELREAAAKRM KSVVSRYKGQ LIAWDVVNEN VHFHFFEDNL 360 GKNASAVYYS AAYHLDPTTN MFMNEYNTIE YSGDKDASPT NYIRKLKEIQ QFPGNAGISL 420 AIGLQCHFSS GVPNIAYMRS GLDLLAATGL PIWLTETSVD PQPNQAEYFE EILREGYSHP 480 AVQGIVMFVG PAQAGFNSTL LADADFQNTP TGDVVDKLIL EWGSGPHTAI ANSRGIIDLS 540 LHHGDYDVTV THPLTNYSKT LNISVRKEFS LESIHVKMHA * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 0.001 | 50 | 133 | 90 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 8.0e-33 | 246 | 478 | 248 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 1.0e-53 | 231 | 510 | 303 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 4.0e-74 | 266 | 515 | 273 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 1 | 580 | 1 | 581 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 27 | 580 | 21 | 575 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313182.1 | 0 | 36 | 567 | 2 | 533 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 39 | 568 | 8 | 537 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002532422.1 | 0 | 38 | 578 | 22 | 562 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1e0v_A | 2e-25 | 235 | 463 | 16 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0n_A | 2e-25 | 235 | 463 | 16 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0m_A | 2e-25 | 235 | 463 | 16 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0l_A | 2e-25 | 235 | 463 | 16 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0k_A | 2e-25 | 235 | 463 | 16 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |