Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g108280.1 |
Family | GT14 |
Protein Properties | Length: 398 Molecular Weight: 44869.2 Isoelectric Point: 8.4441 |
Chromosome | Chromosome/Scaffold: 1 Start: 31813081 End: 31817214 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 50 | 303 | 0 |
FAYFISGGHGDKDRIFRLLLAVYHPRNRYLLHLGMDARNEERQGLADAVSSVPAIRAFGNVDVVGKADWITYLGSSNVAITLRAAAIMLKLDSGWNWFIT LSARDYPLITQDDLSHVFSSVNRDLNFIDHTGDLGWKESDRFKPIVVDPGTYLARRSQIFQATEKRATPDAFKLFTGSPWVTLSRPFLEFCIFGWDNLPR TLLMYFTNVKLSQEGYFHSVICNAPEYKNTTVNGDLRYMIWDNPPKMEPLFLNT |
Full Sequence |
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Protein Sequence Length: 398 Download |
MGAEKKWLFT LFSAAVLSLM LLLMSSFSTF SSQKPFPSFV QHGSHYPPAF AYFISGGHGD 60 KDRIFRLLLA VYHPRNRYLL HLGMDARNEE RQGLADAVSS VPAIRAFGNV DVVGKADWIT 120 YLGSSNVAIT LRAAAIMLKL DSGWNWFITL SARDYPLITQ DDLSHVFSSV NRDLNFIDHT 180 GDLGWKESDR FKPIVVDPGT YLARRSQIFQ ATEKRATPDA FKLFTGSPWV TLSRPFLEFC 240 IFGWDNLPRT LLMYFTNVKL SQEGYFHSVI CNAPEYKNTT VNGDLRYMIW DNPPKMEPLF 300 LNTSVYDMMA ESGAAFARQF EANNPVLDMI DKKILQRGGR NRAAPGAWCS GRRSWWVDPC 360 SQWGDVNILK PGPQAKKLEA SVSSLLDDWT AQTNQCQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-66 | 50 | 296 | 250 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 7.0e-143 | 48 | 397 | 350 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_565009.1 | 0 | 1 | 397 | 1 | 395 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002284096.1 | 0 | 30 | 397 | 35 | 401 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311492.1 | 0 | 1 | 397 | 1 | 390 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315896.1 | 0 | 1 | 397 | 1 | 400 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531062.1 | 0 | 39 | 397 | 39 | 396 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000006 | 46 | 290 | 84 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000006 | 46 | 290 | 84 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000006 | 46 | 290 | 84 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000006 | 46 | 290 | 84 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000002 | 46 | 290 | 84 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |