| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g014290.1 |
| Family | CBM57 |
| Protein Properties | Length: 627 Molecular Weight: 68641.5 Isoelectric Point: 9.2758 |
| Chromosome | Chromosome/Scaffold: 2 Start: 4284609 End: 4290707 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 218 | 360 | 6.1e-24 |
| GGDRFWQHTKTFGQDSDQQRSVESRIKKTSLAPNFYPETLYRSALVSTSSQPDLSYTLDVDPNKNYSIWLHFAEIDNSVHSIGQRVFDIMINGDVAFRDV DIVKLSGDRFTALVLNKTVPVNGRSLAITLRPKEGSLATITAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 627 Download |
| MLRFLLLRMF FLCFASSVAI AAQRGPFAMR ISCGARQNVQ TKPTTTLWYK DFGSTGGIPA 60 NASKTSYITP PLKTLRYFPL SEGPSNCYKI NGVPKGHYSV RIFFALVAQA RATNEPLFDI 120 SIQGTQIYTL KPGWTTQDDQ AFTEAQVFLM DRTVSICFHS TGHGDPAILS IEILQIDGKA 180 YYFGSNWSQE IILRTVKRLS CGFGQSKFGV DYGADPLGGD RFWQHTKTFG QDSDQQRSVE 240 SRIKKTSLAP NFYPETLYRS ALVSTSSQPD LSYTLDVDPN KNYSIWLHFA EIDNSVHSIG 300 QRVFDIMING DVAFRDVDIV KLSGDRFTAL VLNKTVPVNG RSLAITLRPK EGSLATITAI 360 EILEVIVPES KTLSDEVMAL QRLKKDLGLP PRFGWNGDPC VPQQHPWIGV DCQLDKSSGN 420 WVIDGLGLDN QGLKGFLPKD ISRLHNLQII NLSGNSIGGA IPSSLGTVTT LQVLDLSYNV 480 FNGSIPDSLG QLTSLKRLNL NGNFLSGMVP ATLGGRLLHR ASFNFTDNSG LCGIPGLPTC 540 GPHLSAGAKV GIGLGAFFTF LLLITCSVCW CKRRKNIIRA QQIAARAAPY AQKRTHFSRD 600 IQMTRHSNNY GNSHTAAENG PILLGG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.0001 | 29 | 171 | 159 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 3.0e-14 | 426 | 515 | 90 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 2.0e-18 | 198 | 347 | 153 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 6.0e-60 | 31 | 365 | 352 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 22 | 624 | 604 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 24 | 624 | 22 | 623 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 22 | 624 | 22 | 625 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002279791.1 | 0 | 29 | 624 | 1 | 599 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 29 | 624 | 1 | 595 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 1 | 624 | 1 | 628 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.00000000000004 | 433 | 547 | 644 | 755 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |
| PDB | 3rgz_A | 0.000000002 | 422 | 513 | 467 | 558 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |
| PDB | 3rgz_A | 0.0000005 | 412 | 513 | 389 | 486 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |
| PDB | 3rgz_A | 0.000001 | 433 | 514 | 454 | 535 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |
| PDB | 3rgz_A | 0.0005 | 426 | 514 | 348 | 439 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |
