| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g019520.3 |
| Family | GH47 |
| Protein Properties | Length: 439 Molecular Weight: 48134.6 Isoelectric Point: 8.7964 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6335357 End: 6338024 |
| Description | alpha-mannosidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH47 | 143 | 436 | 0 |
| AFTHAWSGYKKYAMGYDELMPVSQHGTDGLGGLGATVVDALDTAMIMGIDEVVAEAGLWVEEHLSERISKKGQVNLFETTIRVLGGLLSAYHLSGGEQGT NVTHAGPKPSVYLETAKNLGDRLLSAFTSSPTPIPFSDVVLHDSSAHNAPGGLSSTSEVSTLQLEFNYLSAVSGDQKYGLEAMKVMEHIKTLPKVEGLVP IYISPDSGQFSGENIRLGSRGDSYYEYLLKVWLQSGTSRDSNSSYLYEMYKEAMTGVRHLLVKKTVPNGLVFVGELPSGSNGGFSPKMDHLVGY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 439 Download |
| MSKSLPYSRK DVDYDNAKFR PRSFFKVITQ SFLTSNRKRD CISCSTGKFL FLILIFGVTY 60 LVLTHTPSPG RVVSRDQVFG IQNNETDNSS NSGAGRLKKF WRRAPRLPPQ LPPDTKVSNN 120 NHVPATLDDK SLWITRQQKV KEAFTHAWSG YKKYAMGYDE LMPVSQHGTD GLGGLGATVV 180 DALDTAMIMG IDEVVAEAGL WVEEHLSERI SKKGQVNLFE TTIRVLGGLL SAYHLSGGEQ 240 GTNVTHAGPK PSVYLETAKN LGDRLLSAFT SSPTPIPFSD VVLHDSSAHN APGGLSSTSE 300 VSTLQLEFNY LSAVSGDQKY GLEAMKVMEH IKTLPKVEGL VPIYISPDSG QFSGENIRLG 360 SRGDSYYEYL LKVWLQSGTS RDSNSSYLYE MYKEAMTGVR HLLVKKTVPN GLVFVGELPS 420 GSNGGFSPKM DHLVGYIS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 1.0e-96 | 128 | 434 | 310 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 5.0e-113 | 143 | 434 | 295 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_564345.1 | 0 | 1 | 437 | 1 | 430 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275664.1 | 0 | 1 | 437 | 1 | 442 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
| RefSeq | XP_002306001.1 | 0 | 1 | 437 | 1 | 438 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002440782.1 | 0 | 2 | 437 | 5 | 441 | hypothetical protein SORBIDRAFT_09g006500 [Sorghum bicolor] |
| RefSeq | XP_002519694.1 | 0 | 1 | 437 | 1 | 429 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fmi_A | 0 | 136 | 437 | 10 | 290 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 136 | 437 | 10 | 290 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 136 | 437 | 10 | 290 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 102 | 437 | 63 | 368 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1dl2_A | 0 | 137 | 437 | 6 | 309 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
