| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g020240.1 |
| Family | GH14 |
| Protein Properties | Length: 536 Molecular Weight: 58678.4 Isoelectric Point: 6.7874 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6680132 End: 6683121 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 86 | 494 | 0 |
| FVGLPLDTVSHDCNSINHSKAIAAGLKALKLLGVEGVELPIWWGIVEKEAMGKYDWSGYLAIAEMIQKVGLKLHVSLCFHGSKKPNIPLPKWISEIGESQ PSIFFTDRSGQVYKECLSLAVDNLPVLNGKTPVQVYQSFCESFKSKFSPFMKSTITGISMGLGPDGKLRYPSHHELPSNGKTQGVGEFQCYDQNMLSLLK QQAESSGNPLWGLGGPHDVPTYDQSPYSNSFFKDGGSWESSYGDFFLSWYSSQLIAHGDSLLSLASSTFGDTGISIYGKIPLMHSWYGTRSHPSELTAGF YNTANLDGYEQVAQMFAKNSCKIILPGMDLSDANQPNETHSSPELLLSQTMTTFRNHGVSISGQNSSELGVPGGFEQMKKNLSGDNVLDLFSYQRMGAYF FSPEHFPSF | |||
| Full Sequence |
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| Protein Sequence Length: 536 Download |
| MEISVIGNSQ VKFGRTDFAC RELGYVILKN NCRFSKGGVC FGQNLRLKKG GGIGLKAIHA 60 EPVREMKNKP SGSRTRSKQA DGVRLFVGLP LDTVSHDCNS INHSKAIAAG LKALKLLGVE 120 GVELPIWWGI VEKEAMGKYD WSGYLAIAEM IQKVGLKLHV SLCFHGSKKP NIPLPKWISE 180 IGESQPSIFF TDRSGQVYKE CLSLAVDNLP VLNGKTPVQV YQSFCESFKS KFSPFMKSTI 240 TGISMGLGPD GKLRYPSHHE LPSNGKTQGV GEFQCYDQNM LSLLKQQAES SGNPLWGLGG 300 PHDVPTYDQS PYSNSFFKDG GSWESSYGDF FLSWYSSQLI AHGDSLLSLA SSTFGDTGIS 360 IYGKIPLMHS WYGTRSHPSE LTAGFYNTAN LDGYEQVAQM FAKNSCKIIL PGMDLSDANQ 420 PNETHSSPEL LLSQTMTTFR NHGVSISGQN SSELGVPGGF EQMKKNLSGD NVLDLFSYQR 480 MGAYFFSPEH FPSFTELVRS LNQPKLHLDD LPTEEEEGAE SAVMSQESSV SMQAA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 2.0e-81 | 83 | 502 | 434 | + beta-amylase | ||
| PLN02161 | PLN02161 | 1.0e-87 | 83 | 502 | 437 | + beta-amylase | ||
| PLN02801 | PLN02801 | 4.0e-90 | 83 | 509 | 450 | + beta-amylase | ||
| PLN00197 | PLN00197 | 2.0e-102 | 82 | 532 | 469 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 3.0e-115 | 72 | 520 | 459 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD38148.1 | 0 | 84 | 535 | 1 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
| EMBL | CAI39245.1 | 0 | 1 | 535 | 1 | 536 | beta-amylase [Glycine max] |
| EMBL | CAN66037.1 | 0 | 1 | 535 | 1 | 541 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002276777.1 | 0 | 1 | 535 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002516865.1 | 0 | 1 | 535 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fa2_A | 0 | 83 | 513 | 13 | 450 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 1b1y_A | 0 | 83 | 502 | 6 | 436 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1v3i_A | 0 | 83 | 509 | 12 | 444 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 2xgi_A | 0 | 83 | 502 | 10 | 440 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 2xgb_A | 0 | 83 | 502 | 10 | 440 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO781436 | 405 | 132 | 536 | 0 |
| HO796964 | 390 | 147 | 536 | 0 |
| FY469673 | 294 | 138 | 431 | 0 |
| GW316805 | 273 | 168 | 440 | 0 |
| HO781436 | 119 | 21 | 138 | 9e-19 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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