| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g028480.1 |
| Family | GH9 |
| Protein Properties | Length: 623 Molecular Weight: 69098.4 Isoelectric Point: 9.3514 |
| Chromosome | Chromosome/Scaffold: 2 Start: 9451701 End: 9456208 |
| Description | glycosyl hydrolase 9A1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 111 | 586 | 0 |
| NYTLALHKALMFFNAQKSGKLPKHNNVSWRGNSGMQDGKGDGVSAAIKDLVGGYYDAGDAIKFNFPQAFSITMLSWSVIEYSGKYEATGELNHVKELIKW GTDYFLKTFNSTADTITTLAAQVGSGVTGEDSTTPNDHYCWMRPEDIDYDRPVTECHSCSDLAAEMAAALAAASIVFKDNKAYSKKLVHGATTLFKFSRD QRGRYSPGRSEAATFYNSTGYFDEFVWGGAWMYFATGNNSYLKLATTPGIAKHAGAFWGGPDYGVFSWDNKLAGAQVLLSRLRLFLSPGYPYEEILRTFH NQTSIVMCSYLPVFTSFNRTKGGLIQLNHGRPQPLQYVVNAAFLATLYSDYLDAADTPGWYCGPNFFSTEKLREFARTQIDYILGKNPRKMSYVVGFGNH YPKHVHHRAASIPKNKVKYNCKGGWKWRESSKPNPNILVGAMVAGPDRHDGFHDVRKNYNYTEPTLAGNAGLVAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 623 Download |
| MSMYGRDPWG GPLEINATDS ATDEDRSRNL NELDRAALSR PLDETQQSWL LGPTEQKKKK 60 KYVDLGCIIV SRKIFVWTVG TILFAAFVAG FVTLIVKTVP RHHKKHPPPD NYTLALHKAL 120 MFFNAQKSGK LPKHNNVSWR GNSGMQDGKG DGVSAAIKDL VGGYYDAGDA IKFNFPQAFS 180 ITMLSWSVIE YSGKYEATGE LNHVKELIKW GTDYFLKTFN STADTITTLA AQVGSGVTGE 240 DSTTPNDHYC WMRPEDIDYD RPVTECHSCS DLAAEMAAAL AAASIVFKDN KAYSKKLVHG 300 ATTLFKFSRD QRGRYSPGRS EAATFYNSTG YFDEFVWGGA WMYFATGNNS YLKLATTPGI 360 AKHAGAFWGG PDYGVFSWDN KLAGAQVLLS RLRLFLSPGY PYEEILRTFH NQTSIVMCSY 420 LPVFTSFNRT KGGLIQLNHG RPQPLQYVVN AAFLATLYSD YLDAADTPGW YCGPNFFSTE 480 KLREFARTQI DYILGKNPRK MSYVVGFGNH YPKHVHHRAA SIPKNKVKYN CKGGWKWRES 540 SKPNPNILVG AMVAGPDRHD GFHDVRKNYN YTEPTLAGNA GLVAALVALS GDKSIPIDKN 600 TLFSAVPPMF PTPPPPPAPW KP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02266 | PLN02266 | 4.0e-115 | 99 | 574 | 491 | + endoglucanase | ||
| PLN02340 | PLN02340 | 2.0e-116 | 111 | 575 | 477 | + endoglucanase | ||
| PLN02171 | PLN02171 | 3.0e-119 | 111 | 575 | 477 | + endoglucanase | ||
| PLN02345 | PLN02345 | 2.0e-148 | 115 | 575 | 471 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-168 | 111 | 575 | 471 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ08018.1 | 0 | 3 | 606 | 1 | 603 | endo-1,4-beta-glucanase [Gossypium hirsutum] |
| GenBank | AAT75041.1 | 0 | 3 | 606 | 1 | 603 | Cel9A [Populus tremula x Populus tremuloides] |
| GenBank | ABD32918.1 | 0 | 1 | 606 | 1 | 606 | Glycoside transferase, six-hairpin, subgroup [Medicago truncatula] |
| GenBank | ABD62083.1 | 0 | 3 | 608 | 1 | 604 | endo-1,4-beta-glucancase precursor [Glycine max] |
| RefSeq | XP_002519394.1 | 0 | 1 | 606 | 1 | 605 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 111 | 589 | 4 | 428 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1ksc_A | 0 | 111 | 589 | 4 | 428 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1ks8_A | 0 | 111 | 589 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 108 | 589 | 2 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 108 | 589 | 2 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
