Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr2g034720.1 |
Family | GH3 |
Protein Properties | Length: 763 Molecular Weight: 82605.2 Isoelectric Point: 8.5782 |
Chromosome | Chromosome/Scaffold: 2 Start: 12118654 End: 12124856 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 74 | 321 | 0 |
AVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFSAATSFPQVITTAASFNQSLWLEIGRIVSDEARAMYNGGAAGLTFWSPNVNIFRDPRWGRGQETPGE DPTVAGKYAASYVQGLQGNGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLADTYDVPFKACVRDGKVASVMCSYNQVNGKPTCADPELLRN TIRGEWGLNGYIVSDCDSVGVLYDNQHYTRTPEQAAAAAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 763 Download |
MGCFKNLITF MLLISILVTL SEGRVPFACD PKNGLTRSYK FCNTRVPIHA RVQDLIGRLA 60 LPEKIRLVVN NAIAVPRLGI QGYEWWSEAL HGVSNVGPGT KFGGAFSAAT SFPQVITTAA 120 SFNQSLWLEI GRIVSDEARA MYNGGAAGLT FWSPNVNIFR DPRWGRGQET PGEDPTVAGK 180 YAASYVQGLQ GNGAGNRLKV AACCKHYTAY DLDNWNGVDR FHFNAKVSKQ DLADTYDVPF 240 KACVRDGKVA SVMCSYNQVN GKPTCADPEL LRNTIRGEWG LNGYIVSDCD SVGVLYDNQH 300 YTRTPEQAAA AAIKAGLDLD CGPFLALHTD GAIKQGLISE NDLNLALANL ITVQMRLGMF 360 DGDAQPYGNL GTRDVCLPSH NDVALEAARQ GIVLLQNKGN ALPLSPTRYR TVGVIGPNSD 420 VTVTMIGNYA GIACGYTTPL QGIARYVKTI HQAGCKDVGC GGNQLFGLSE QVARQADATV 480 LVMGLDQSIE AEFRDRTGLL LPGHQQELVS RVARAARGPV ILVLMSGGPI DVTFAKNDPK 540 ISAILWVGYP GQSGGTAIAD VIFGRTNPSG RLPNTWYPQD YVRKVPMTNM DMRANPATGY 600 PGRTYRFYKG PVVFPFGHGL SYSRFTHSLA LAPKQVSVQF TTPLTQAFTN SSNKAMKVSH 660 ANCDELEVGF HVDVKNEGSM DGAHTLLVYS KAPNGVKQLV NFHKTYVPAG SKTRVKVGVH 720 VCNHLSAVDE FGVRRIPMGE HELQIGDLKH SILVQTLDQI KH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 2.0e-58 | 70 | 456 | 393 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-61 | 62 | 353 | 296 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-61 | 392 | 624 | 241 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-73 | 110 | 715 | 657 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 9 | 755 | 780 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS17751.2 | 0 | 6 | 755 | 10 | 764 | beta xylosidase [Fragaria x ananassa] |
DDBJ | BAD98523.1 | 0 | 22 | 761 | 27 | 773 | alpha-L-arabinofuranosidase / beta-D-xylosidase [Pyrus pyrifolia] |
DDBJ | BAF79669.1 | 0 | 22 | 761 | 27 | 773 | beta-D-xylosidase [Pyrus pyrifolia] |
RefSeq | XP_002316021.1 | 0 | 20 | 761 | 21 | 767 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 20 | 762 | 35 | 782 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 110 | 715 | 91 | 692 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 3u48_A | 0 | 110 | 715 | 91 | 692 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 3u4a_B | 0 | 110 | 715 | 91 | 692 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 3u4a_A | 0 | 110 | 715 | 91 | 692 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 2x41_A | 1.4013e-45 | 51 | 755 | 3 | 708 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |