| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g039530.1 |
| Family | CE8 |
| Protein Properties | Length: 342 Molecular Weight: 38215.5 Isoelectric Point: 9.4862 |
| Chromosome | Chromosome/Scaffold: 2 Start: 14656232 End: 14657407 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 52 | 315 | 0 |
| AVVASDGSGNYMKIMDAVMAAPNGSKKRYVIHIKKGVYNEHVMINNSKSNLMMIGDGMGATVITGDLSWGRDKLDTSYTYTFGVEGLGFSAQDISFRNTA WPENHQAVALLSDSDTSVFYRCEISGFQDSLCANIKHHSIRIAKSEARLTSYLVRQLSSFKTDILVRKGPTGQQNTITAQGGPEKPNLPFGFAFQFCNVC ADPEFLPFVNLPKHSSEDRRRLEALLTSSWLEWNNTAVYLDTLYYAEYNNHGSRAAVQNRVKWP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 342 Download |
| MSPSRIFFLF CFFFRTSSSD ILDTITQKGK FPSWVKPGDR KLLQASAVPA DAVVASDGSG 60 NYMKIMDAVM AAPNGSKKRY VIHIKKGVYN EHVMINNSKS NLMMIGDGMG ATVITGDLSW 120 GRDKLDTSYT YTFGVEGLGF SAQDISFRNT AWPENHQAVA LLSDSDTSVF YRCEISGFQD 180 SLCANIKHHS IRIAKSEARL TSYLVRQLSS FKTDILVRKG PTGQQNTITA QGGPEKPNLP 240 FGFAFQFCNV CADPEFLPFV NLPKHSSEDR RRLEALLTSS WLEWNNTAVY LDTLYYAEYN 300 NHGSRAAVQN RVKWPGYHAG PAYCILRPKA KFRQSLLYAF R* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 3.0e-60 | 31 | 317 | 304 | + pectinesterase | ||
| PLN02506 | PLN02506 | 2.0e-61 | 25 | 318 | 309 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 7.0e-63 | 28 | 318 | 317 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-87 | 58 | 318 | 284 | + Pectinesterase. | ||
| PLN02201 | PLN02201 | 1.0e-94 | 29 | 318 | 311 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK92470.1 | 0 | 30 | 318 | 194 | 492 | unknown [Populus trichocarpa] |
| GenBank | ABN05750.1 | 0 | 1 | 341 | 1 | 337 | Pectinesterase [Medicago truncatula] |
| DDBJ | BAF42041.1 | 0 | 29 | 318 | 174 | 473 | pectin methylesterase 4 [Pyrus communis] |
| EMBL | CBI29628.1 | 0 | 31 | 318 | 194 | 491 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002326321.1 | 0 | 30 | 318 | 186 | 484 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 48 | 318 | 1 | 281 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 1.4013e-45 | 44 | 317 | 1 | 284 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 0.000003 | 42 | 182 | 23 | 182 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.00003 | 47 | 182 | 1 | 156 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.00003 | 47 | 182 | 1 | 156 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
