Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr2g042610.1 |
Family | GH35 |
Protein Properties | Length: 831 Molecular Weight: 93311.8 Isoelectric Point: 5.7131 |
Chromosome | Chromosome/Scaffold: 2 Start: 15501221 End: 15506702 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 336 | 0 |
IDGKRRVLISGSIHYPRSTPQMWPDLIKKAKEGGLDAIETYVFWNAHEPIRREYDFSGNNDLIRFLKTIQDEGLFAVLRIGPYVCAEWNYGGIPVWVYNL PGVEIRTANKVFMNEMQNFTTLIVDMVRKEKLFASQGGPIILSQIENEYGNVMSAYGDEGKAYINWCANMADSFNIGVPWIMCQQPDAPQPMINTCNGWY CHDFEPNNPNSPKMWTENWVGWFKNWGGKDPHRTAEDIAYSVARFFETGGTFQNYYMYHGGTNFGRTAGGPYITTSYDYDAPLDEYGNIAQPKWGHLKEL H |
Full Sequence |
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Protein Sequence Length: 831 Download |
MASKCFVFPF FLCYIFLALY GTYAVEVSHD GRAIKIDGKR RVLISGSIHY PRSTPQMWPD 60 LIKKAKEGGL DAIETYVFWN AHEPIRREYD FSGNNDLIRF LKTIQDEGLF AVLRIGPYVC 120 AEWNYGGIPV WVYNLPGVEI RTANKVFMNE MQNFTTLIVD MVRKEKLFAS QGGPIILSQI 180 ENEYGNVMSA YGDEGKAYIN WCANMADSFN IGVPWIMCQQ PDAPQPMINT CNGWYCHDFE 240 PNNPNSPKMW TENWVGWFKN WGGKDPHRTA EDIAYSVARF FETGGTFQNY YMYHGGTNFG 300 RTAGGPYITT SYDYDAPLDE YGNIAQPKWG HLKELHLVLK SMENSLTNGN VSKIDLGSYV 360 KATVYATNDS SSCFLTNTNT TTDATVTFKG NTYNVPAWSV SILPDCQTEE YNTAKVNVQT 420 SIMVKRENKA EDEPEALKWV WRAENVHNSL IGKSSVSKNT IVDQKIAAND SSDYLWYMTR 480 LDINQKDPVW TNNTILRING TGHVIHAFVN GEHIGSHWAT YGIHNDQFET NIKLKHGRND 540 ISLLSVTVGL QNYGKEYDKW QDGLVSPIEL IGTKGDETII KDLSSHKWTY KVGLHGWENK 600 FFSQDTFFAS SSKWESNELP INKMLTWYKT TFKAPLESDP IVVDLQGMGK GYAWVNGHSL 660 GRYWPSYNAD EDGCSDDPCD YRGEYNDTKC VSNCGKPSQR WYHVPRDFIE DGVNTLVLFE 720 EIGGNPSQIN FQTVIVGSAC ANAYENKTLE LSCHGRSISD IKFASFGNPQ GTCGAFTKGS 780 CESNNEALSL VQKACVGKES CSIDVSEKTF GATNCGNMVK RLAVEAVCAI * 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0001 | 49 | 204 | 170 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-19 | 751 | 828 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 9.0e-22 | 27 | 329 | 358 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-156 | 36 | 336 | 316 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 6 | 829 | 849 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 8 | 828 | 4 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 10 | 828 | 24 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 12 | 828 | 11 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 1 | 828 | 1 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 2 | 828 | 27 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 36 | 335 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0002 | 534 | 664 | 435 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 2e-39 | 36 | 323 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 2e-39 | 36 | 323 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |