| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g044650.1 |
| Family | CE8 |
| Protein Properties | Length: 295 Molecular Weight: 33043.7 Isoelectric Point: 8.0848 |
| Chromosome | Chromosome/Scaffold: 2 Start: 15874046 End: 15875304 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 14 | 278 | 0 |
| RYVVYVKEGVYDETVTVTKKMVNLTMYGDGGLKSIITGNKNFVDGVRTFQTASFVVLGDGFVGRDMGFRNTAGAIKEQAVAARVQADCSIFVNCNFEGYQ DTLYAQTHRQFYRDCVISGTIDFIFGHASAVFQNCQLVLRKPLDNQKNIITANGRIDSKSNTAFVLQKCVIKGEDDLPSTTKNYIGRPWKEYSRTIIMES DIPALIQPEGWLPWEGDFALKTLYYGEYDNVGAGAKTDARVKWIGRKDIKRGEALTYTVEPFLDG | |||
| Full Sequence |
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| Protein Sequence Length: 295 Download |
| MIMLRIYFQT WTCRYVVYVK EGVYDETVTV TKKMVNLTMY GDGGLKSIIT GNKNFVDGVR 60 TFQTASFVVL GDGFVGRDMG FRNTAGAIKE QAVAARVQAD CSIFVNCNFE GYQDTLYAQT 120 HRQFYRDCVI SGTIDFIFGH ASAVFQNCQL VLRKPLDNQK NIITANGRID SKSNTAFVLQ 180 KCVIKGEDDL PSTTKNYIGR PWKEYSRTII MESDIPALIQ PEGWLPWEGD FALKTLYYGE 240 YDNVGAGAKT DARVKWIGRK DIKRGEALTY TVEPFLDGSW INGTGVPAHL GLYN* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02217 | PLN02217 | 2.0e-117 | 15 | 293 | 283 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 7.0e-120 | 14 | 292 | 280 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 7.0e-121 | 15 | 294 | 284 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-156 | 14 | 279 | 270 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 2.0e-167 | 14 | 293 | 283 | + Putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA89480.1 | 0 | 14 | 292 | 315 | 596 | pectin methylesterase [Salix gilgiana] |
| RefSeq | XP_002273499.1 | 0 | 14 | 293 | 311 | 597 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324181.1 | 0 | 14 | 293 | 311 | 593 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326319.1 | 0 | 14 | 292 | 314 | 597 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516193.1 | 0 | 9 | 293 | 306 | 593 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 14 | 292 | 36 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 14 | 294 | 32 | 317 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 5e-19 | 15 | 280 | 35 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 5e-19 | 15 | 280 | 35 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 5e-19 | 15 | 280 | 35 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CF208165 | 240 | 14 | 250 | 0 |
| DY918939 | 287 | 14 | 295 | 0 |
| GR194961 | 273 | 14 | 281 | 0 |
| DY918231 | 287 | 14 | 295 | 0 |
| DY918427 | 280 | 21 | 295 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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