Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr2g044880.1 |
Family | CE8 |
Protein Properties | Length: 528 Molecular Weight: 58049.8 Isoelectric Point: 6.4058 |
Chromosome | Chromosome/Scaffold: 2 Start: 15989084 End: 15994599 |
Description | pectin methylesterase 44 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 214 | 510 | 0 |
DVVVATDGSGNFTKVMDAVHAAPDYSMKRYVIYVKRGVYIENVEIKKKKWNLMMVGDGMNATIITGNRSFIDGWTTFRSATFAVSGRGFIARDISFQNTA GPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFFRECKISGTVDFIFGDATTLFQNCQILVKKGLPNQKNTITAHGRKDPNEPTGFSIQFCNIT ADTDLLPSVNSTYTYLGRPWKEYSRTIFMQSHISDVLRPEGWLEWNGDFALDTLYYAEYMNYGSGAGLNKRVKWPGYHIMNDSSQASNFTVTQFIEG |
Full Sequence |
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Protein Sequence Length: 528 Download |
MALSSTKELV LSRTKPIPTL ITCTFILTLL LSTPALCASA PTKATSEFEF LKVAPSEFVG 60 TVQDVVGILQ EVMSILSQFG GSGFGDSRLS NAVSDCIDML DLSSDALTWS ASAAQNPKGK 120 HNSTGNVNSD VRTWLSSALA NPETCMDGFE GTSGIESQLV STGLSQMMSM LAELLTQVDP 180 NLDSFTQKEQ KGRFPSWVKR DDRKLLQANG VNVDVVVATD GSGNFTKVMD AVHAAPDYSM 240 KRYVIYVKRG VYIENVEIKK KKWNLMMVGD GMNATIITGN RSFIDGWTTF RSATFAVSGR 300 GFIARDISFQ NTAGPEKHQA VALRSDSDLS VFYRCGIFGY QDSLYTHTMR QFFRECKISG 360 TVDFIFGDAT TLFQNCQILV KKGLPNQKNT ITAHGRKDPN EPTGFSIQFC NITADTDLLP 420 SVNSTYTYLG RPWKEYSRTI FMQSHISDVL RPEGWLEWNG DFALDTLYYA EYMNYGSGAG 480 LNKRVKWPGY HIMNDSSQAS NFTVTQFIEG NLWLPTTGVA FTAGLGV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 2.0e-172 | 86 | 527 | 458 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 36 | 527 | 512 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 214 | 511 | 298 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 86 | 525 | 449 | + pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 0 | 87 | 526 | 451 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 36 | 527 | 28 | 528 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 49 | 527 | 35 | 509 | pectin methylesterase 4 [Pyrus communis] |
RefSeq | NP_567917.4 | 0 | 25 | 525 | 7 | 523 | enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q43062 | 0 | 49 | 527 | 47 | 522 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 34 | 527 | 18 | 520 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 214 | 525 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 207 | 525 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-23 | 225 | 516 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-23 | 225 | 516 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-23 | 225 | 516 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX523117 | 261 | 265 | 525 | 0 |
DY290214 | 356 | 149 | 489 | 0 |
GO242458 | 311 | 193 | 503 | 0 |
GO330324 | 261 | 249 | 509 | 0 |
CV233766 | 273 | 256 | 528 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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