CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr2g049130.1
FamilyGH16
Protein PropertiesLength: 284 Molecular Weight: 33049.9 Isoelectric Point: 4.9382
ChromosomeChromosome/Scaffold: 2 Start: 17166352 End: 17167804
Descriptionxyloglucan endotransglucosylase/hydrolase 2
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16312059.2e-22
  QNYAPLWGQENMQILNQSREVQLTLNQESGSGFQSIHKYSSGWFNMKIKLPQNDSTEVITTFYLISVDGPTRDEIDFEFLGGNKERSHILHTNIFTNGQG
  GREQQFQFWFDPTADFHDYTFLWNEKQLVFFVDNIPIRVFKNNTDKGGSYPTQAMKIYATIWSSPWGSGGVPINW
Full Sequence
Protein Sequence     Length: 284     Download
MCLSPLSFLI VFLLGPLNVK GVDWDNVPFM QNYAPLWGQE NMQILNQSRE VQLTLNQESG    60
SGFQSIHKYS SGWFNMKIKL PQNDSTEVIT TFYLISVDGP TRDEIDFEFL GGNKERSHIL    120
HTNIFTNGQG GREQQFQFWF DPTADFHDYT FLWNEKQLVF FVDNIPIRVF KNNTDKGGSY    180
PTQAMKIYAT IWSSPWGSGG VPINWNEAPF EAHYRGFGIN ACQSQNPNIE QCNSFRYWWN    240
TENYWELNFD QKQAYNNVRS KYLIYDYCTK QPENLECQGL HLN* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00413Glyco_hydrolase_163.0e-1937215193+
cd02183GH16_fungal_CRH1_transglycosylase1.0e-1988215143+
pfam00722Glyco_hydro_168.0e-5829205181+
PLN03161PLN031613.0e-673268273+
cd02176GH16_XET2.0e-11427269248+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN79775.102927816269hypothetical protein [Vitis vinifera]
RefSeqNP_193045.101027313280xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana]
RefSeqXP_002278718.102927816269PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002301792.102627312262predicted protein [Populus trichocarpa]
RefSeqXP_002521076.1062731275Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B02627114262A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins
PDB1un1_A02627114262A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins
PDB1umz_B02627114262A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A02627114262A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B3.00018e-422926820254A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Signal Peptide
Cleavage Site
21
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CO11654927732710
ES82789227732710
EE26019126162580
DY94772427812710
DY83292026982710
Orthologous Group
SpeciesID
Arabidopsis lyrata884593899104485216359038359039
883627883616
Arabidopsis thalianaAT4G13090.1AT3G25050.1AT3G48580.1AT4G13080.1
Brachypodium distachyonBradi1g44777.1Bradi1g71937.1
Brassica rapaBra001434Bra015093Bra001433
Carica papayaevm.model.supercontig_8.136
Capsella rubellaCarubv10016385mCarubv10005358mCarubv10006916mCarubv10006944mCarubv10018461m
Citrus clementinaCiclev10033360mCiclev10023425m
Citrus sinensisorange1.1g042925morange1.1g041460m
Cucumis sativusCucsa.067150.1
Eucalyptus grandisEucgr.H00787.1Eucgr.H00788.1Eucgr.K02717.1Eucgr.K02715.1
Fragaria vescamrna17598.1-v1.0-hybrid
Glycine maxGlyma18g35720.2Glyma18g35720.1Glyma08g46450.1
Gossypium raimondiiGorai.007G155700.1Gorai.004G226400.1
Linum usitatissimumLus10032879Lus10025919Lus10038182Lus10022784Lus10011845
Lus10022782
Malus domesticaMDP0000311020
Manihot esculentacassava4.1_032567m
Medicago truncatulaMedtr2g049030.1
Mimulus guttatusmgv1a010995mmgv1a011712mmgv1a020473mmgv1a011649mmgv1a025665m
mgv1a019895mmgv1a020281mmgv1a021895mmgv1a011700mmgv1a010970m
Oryza sativaLOC_Os06g13040.1
Panicum virgatumPavirv00069636mPavirv00044296mPavirv00046059m
Phaseolus vulgarisPhvul.008G129900.1Phvul.008G129100.1
Picea abiesMA_300041g0010MA_10083496g0010MA_254951g0010
Populus trichocarpaPotri.002G244200.1
Prunus persicappa019741mppa027154m
Ricinus communis30204.m00174129904.m002924
Setaria italicaSi007117mSi006999m
Selaginella moellendorffii403283
Sorghum bicolorSb10g008540.1Sb10g008550.1
Thellungiella halophilaThhalv10002629mThhalv10010620mThhalv10026812m
Vitis viniferaGSVIVT01003280001GSVIVT01004746001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny