Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr2g049670.1 |
Family | CBM43 |
Protein Properties | Length: 329 Molecular Weight: 33658.8 Isoelectric Point: 4.4734 |
Chromosome | Chromosome/Scaffold: 2 Start: 17406942 End: 17409293 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 158 | 239 | 3.9e-34 |
WCVASESAAETTLKVALDYACGYGADCSQLQQGGACYDPNTLKDHASYAFNDYYQKNPAPTSCVFGGVASLTSKDPSHGNCH |
Full Sequence |
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Protein Sequence Length: 329 Download |
MGARSWHLVL FSLCLSLSSG LGTAIRLRED SSYEFSTTQS DSIPIVNPTT PGTGGNPYPT 60 INPTSPQPPD TSTGGQNPPS PDTDTTSPTN PYSNPPTSTS PYSNPPASTN PYSNPPASTN 120 PYSNPTSPTT TTPTSPTVTP TTPGTGSSGG GGGGGGQWCV ASESAAETTL KVALDYACGY 180 GADCSQLQQG GACYDPNTLK DHASYAFNDY YQKNPAPTSC VFGGVASLTS KDPSHGNCHF 240 SSSKTTSMSP PTYVSPPTTM TPPTPMTMTP PSSMTPPSMT MPDPDGGSSS VYGSPPGGSP 300 NMATSTSYSI LLLLTTSLYA TLHVQNYV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-19 | 157 | 227 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-35 | 157 | 240 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94231.1 | 0 | 28 | 324 | 47 | 304 | unknown [Populus trichocarpa] |
EMBL | CBI30817.1 | 4.99983e-42 | 156 | 300 | 33 | 164 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271903.1 | 3.00004e-41 | 156 | 300 | 128 | 259 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002512573.1 | 4e-36 | 85 | 240 | 132 | 308 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002519744.1 | 2e-40 | 155 | 242 | 112 | 200 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-16 | 156 | 240 | 11 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |