| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g069330.1 |
| Family | GT33 |
| Protein Properties | Length: 499 Molecular Weight: 55888.8 Isoelectric Point: 7.6655 |
| Chromosome | Chromosome/Scaffold: 2 Start: 22099148 End: 22103456 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT33 | 16 | 475 | 0 |
| RACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLMKQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIF IVQNPPSVPTLVAVKWASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWFEKHYGKMADTSLCVTKAMQHELAQNWGINATVLYDQPPDFFHPASL EERHKLFCRLNEHFYHPLGVGDCVSNGTSLMSSQIQNETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSLDEEVI WKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSADDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKEL VSVDKNGLLFSSSSELADELLTLFKGFPNECDSLKVLKSGALDTGASSRWVTEWEEHAKP | |||
| Full Sequence |
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| Protein Sequence Length: 499 Download |
| MAGKSKEKME GGRRGRACVV VLGDIGRSPR MQYHALSLSN QAFLEVDIVA YGGSEPHTSL 60 LANPSIHIHL MKQWPTARQN LPKILQPFML LLKPLIQFVM LLWYLCVKIP SPDIFIVQNP 120 PSVPTLVAVK WASWLRNSSF VIDWHNFGYT LLGMSLGRNS RFVSLYKWFE KHYGKMADTS 180 LCVTKAMQHE LAQNWGINAT VLYDQPPDFF HPASLEERHK LFCRLNEHFY HPLGVGDCVS 240 NGTSLMSSQI QNETLFTTEA GSNVSLKPNR PALVVSSTSW TPDEDFGILL EAALMYDRRV 300 AAILNEDDSL DEEVIWKEIS DGKQCLYPRL LFVITGKGPE KAKYEAKIKS LKLKRVAFRT 360 MWLSADDYPL LLGSADLGVC LHTSSSGLDL PMKVVDMFGC GLPVCAVSYS CIKELVSVDK 420 NGLLFSSSSE LADELLTLFK GFPNECDSLK VLKSGALDTG ASSRWVTEWE EHAKPLITEA 480 SSYCYIKILI FCVLRRRF* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0438 | RfaG | 4.0e-10 | 51 | 440 | 405 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| cd01635 | Glycosyltransferase_GTB_type | 3.0e-10 | 327 | 425 | 100 | + Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| TIGR00032 | argG | 4.0e-11 | 328 | 440 | 115 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| PLN02275 | PLN02275 | 0 | 12 | 439 | 428 | + transferase, transferring glycosyl groups | ||
| cd03816 | GT1_ALG1_like | 0 | 14 | 477 | 466 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI19390.1 | 0 | 1 | 485 | 1 | 484 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001049165.1 | 0 | 9 | 479 | 5 | 470 | Os03g0180700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002283369.1 | 0 | 1 | 485 | 116 | 598 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002330745.1 | 0 | 12 | 490 | 2 | 478 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532170.1 | 0 | 14 | 482 | 8 | 472 | beta1,4 mannosyltransferase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DW017293 | 255 | 1 | 255 | 0 |
| DV132185 | 272 | 135 | 406 | 0 |
| GO872658 | 337 | 13 | 349 | 0 |
| FG904027 | 234 | 1 | 234 | 0 |
| JG909886 | 295 | 157 | 451 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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