| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g074880.1 |
| Family | CBM57 |
| Protein Properties | Length: 256 Molecular Weight: 28176.2 Isoelectric Point: 6.2644 |
| Chromosome | Chromosome/Scaffold: 2 Start: 22779960 End: 22782054 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 7 | 172 | 5.2e-30 |
| LYINCGGKQVIVNGKSYYGDSDSSRPARSDVSPTENWAFSSTGRFLDSDQLGDTYSSQSISKLTMVDAELYTNERVSLTYYGFCLANGSYTVNLHFAEIM FTDDQTYSSLGRRVFDIYIQGMQVQKDFNIAEAAGGVGKKVIKQFKDVVVTSNTLEILYGPLISAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 256 Download |
| MTSSYTLYIN CGGKQVIVNG KSYYGDSDSS RPARSDVSPT ENWAFSSTGR FLDSDQLGDT 60 YSSQSISKLT MVDAELYTNE RVSLTYYGFC LANGSYTVNL HFAEIMFTDD QTYSSLGRRV 120 FDIYIQGMQV QKDFNIAEAA GGVGKKVIKQ FKDVVVTSNT LEILYGPLIS AISVKSGGLC 180 VTLHLQAYIS AGTVVGLLVA ATIVIILIFG ILWWKECFGK KNSLEREMEP LDNSIFLLSF 240 PKKFIQETHS MGLRG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12819 | Malectin_like | 1.0e-5 | 93 | 172 | 91 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 4.0e-8 | 74 | 174 | 107 | + hypothetical protein; Provisional | ||
| pfam11721 | Malectin | 2.0e-41 | 5 | 172 | 189 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAU10526.1 | 0 | 5 | 232 | 402 | 645 | putative receptor-like protein kinase 2 [Glycine max] |
| EMBL | CAN74151.1 | 0 | 5 | 232 | 273 | 518 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI20121.1 | 0 | 5 | 232 | 398 | 643 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI20129.1 | 0 | 5 | 174 | 80 | 267 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002524511.1 | 0 | 5 | 176 | 375 | 563 | ATP binding protein, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2kr2_A | 0.007 | 73 | 141 | 57 | 122 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 2k46_A | 0.007 | 73 | 141 | 57 | 122 | A Chain A, Xenopus Laevis Malectin Complexed With Nigerose (Glcalpha1- 3glc) |
| PDB | 2jwp_A | 0.007 | 73 | 141 | 53 | 118 | A Chain A, Malectin |
