Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr2g074980.1 |
Family | CBM57 |
Protein Properties | Length: 559 Molecular Weight: 61547.3 Isoelectric Point: 6.509 |
Chromosome | Chromosome/Scaffold: 2 Start: 22814302 End: 22819787 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 362 | 546 | 6.3e-29 |
LYINCGGSRAKVNKTSYDDDSDSPGPARFYRSPTGNWALSTTGIYIDSDQLQINYSPKNITRLTMVDAELYTNARVSPISLTYYGFCLANGRYTVYLHFA EIMFTDDDSYGSLGRRVFDIYLQGKPVKKEFNIAEEAGGVGKKVMKQFKDVVVTSNTLEIRLYWAGKGTQSLPNRSVYGPLISAI |
Full Sequence |
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Protein Sequence Length: 559 Download |
MATSTQCFFL SLILIWLISQ TSFGANTIHP DEKKALEVIA KSLGKKDWNF DIDPCSNKPN 60 WFTPPIPKIV ENNVTCDCSI PGDNFCHVVA ITLKGQNLPG TLPPEMNRLH YLQIIELPRN 120 YLNGPIPKEW GSMTNLRQIS LFGNRLTGSI PAEIANISTL QILVLVGNQM SGNIPPELGN 180 LTQIRILQFS SNNFTVELPM TLAKLITLQD LLIQGSGLSG PIPSGISLLR NLTDLRISDL 240 SGSEYAPLIL RNCNINGKLL DYLGNMGLLK HLDLSFNNIS GTIPSTYAAM NSLEYIFLTG 300 NLLTGPVPPA LGHNADVDLS YNNFSISENQ KCQDEKVNLF STSSARNDLF SHDLLNPASY 360 SLYINCGGSR AKVNKTSYDD DSDSPGPARF YRSPTGNWAL STTGIYIDSD QLQINYSPKN 420 ITRLTMVDAE LYTNARVSPI SLTYYGFCLA NGRYTVYLHF AEIMFTDDDS YGSLGRRVFD 480 IYLQGKPVKK EFNIAEEAGG VGKKVMKQFK DVVVTSNTLE IRLYWAGKGT QSLPNRSVYG 540 PLISAISIES GGLYLAHF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 2.0e-22 | 72 | 325 | 257 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 3.0e-24 | 91 | 325 | 238 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 2.0e-24 | 80 | 311 | 238 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 4.0e-30 | 47 | 325 | 283 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 1.0e-58 | 360 | 546 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU10526.1 | 0 | 27 | 549 | 28 | 589 | putative receptor-like protein kinase 2 [Glycine max] |
EMBL | CBI20121.1 | 0 | 22 | 549 | 22 | 586 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20124.1 | 0 | 34 | 549 | 63 | 615 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20127.1 | 0 | 34 | 549 | 34 | 586 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002524514.1 | 0 | 4 | 548 | 9 | 583 | ATP binding protein, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rj0_A | 3e-18 | 93 | 312 | 398 | 674 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3rj0_A | 6e-16 | 11 | 311 | 149 | 459 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3rj0_A | 0.000000000000001 | 60 | 325 | 401 | 714 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3rj0_A | 0.00000000001 | 88 | 286 | 367 | 554 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3rj0_A | 0.000000004 | 86 | 223 | 584 | 718 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |