Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr2g075140.1 |
Family | CBM57 |
Protein Properties | Length: 644 Molecular Weight: 70527.5 Isoelectric Point: 7.4928 |
Chromosome | Chromosome/Scaffold: 2 Start: 22908901 End: 22915136 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 419 | 603 | 4.1e-27 |
LYINCGGKQAIVDGKSYDGDSDLPGPARFHANPTGNWAYSTTGVFVESNQLGDTYSPKNITKLTMVDAELYTNARASPTSLTYYGFCLANGSYIVNLHFA EIMIPDDQTYGSLGRRVFDIYLQGKPVQKDFNIAKEAGGVGKKVIKQFKDIIVSSNTLEIRLYWAGKGTQSLPNKSIYGPLISAI |
Full Sequence |
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Protein Sequence Length: 644 Download |
MNTSSQFLFL SLISIWFISL TAFAATTIHP DEKKALEVIA KSLGKKDWNF DIDPCSNKPN 60 WVTPTIPNVV ENNVICNCSV AGDNFCHVVE INLKGQNLQG TLPSELNRLR YLQVIDLARN 120 NLKGPIPKEW GSLTNIYKFA LLGNQLTGSI PVEIANLSAL QILELFNNQF SGNLPPGLGH 180 LTQIQILRLS SNKFTGELPA TFAKLTTLQE FRIEDNQFSG KIPNFIQNWT SINKLMIQGS 240 GLSGPIPSGI SLLTNLTDLR ISDLNGSEYS HLPQLNNMKS LNRFSKNVIH NIQLSILLFH 300 RILRNCNING TLPENLRTIT TLKHLDLGFN NLSGTIPRTY ADMNGLKYIF LTGNLLTGPV 360 PSWRKNVSVD LSYNNFSISQ GSQICKDENV NSFVFELEMP QTCSHDLLLS LLNPAANSLY 420 INCGGKQAIV DGKSYDGDSD LPGPARFHAN PTGNWAYSTT GVFVESNQLG DTYSPKNITK 480 LTMVDAELYT NARASPTSLT YYGFCLANGS YIVNLHFAEI MIPDDQTYGS LGRRVFDIYL 540 QGKPVQKDFN IAKEAGGVGK KVIKQFKDII VSSNTLEIRL YWAGKGTQSL PNKSIYGPLI 600 SAISVESSDS QPGSISADSS PDSITAGAVV GILVAATILI LSF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 2.0e-26 | 96 | 376 | 321 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 5.0e-30 | 91 | 377 | 297 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 3.0e-30 | 91 | 377 | 296 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 1.0e-33 | 53 | 377 | 357 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 1.0e-52 | 420 | 603 | 186 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU10526.1 | 0 | 24 | 612 | 25 | 595 | putative receptor-like protein kinase 2 [Glycine max] |
EMBL | CBI20121.1 | 0 | 17 | 606 | 17 | 586 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20124.1 | 0 | 34 | 606 | 63 | 615 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20127.1 | 0 | 34 | 606 | 34 | 586 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002524514.1 | 0 | 8 | 605 | 6 | 583 | ATP binding protein, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rgz_A | 3e-22 | 60 | 377 | 379 | 717 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3rgz_A | 2e-21 | 109 | 377 | 268 | 527 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3rgz_A | 2e-20 | 84 | 361 | 416 | 721 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3rgz_A | 2e-18 | 112 | 362 | 296 | 556 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3rgz_A | 2e-16 | 108 | 361 | 149 | 459 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |