| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g088080.2 |
| Family | AA1 |
| Protein Properties | Length: 459 Molecular Weight: 50857 Isoelectric Point: 8.8169 |
| Chromosome | Chromosome/Scaffold: 2 Start: 27358496 End: 27360768 |
| Description | SKU5 similar 5 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 7 | 418 | 0 |
| GVQQRRNSWQDGVYGTNCPIPPGQNFTYVLQVKDQIGSYFYFPSLALHKAAGGYGGIKINSRPMIPVPFPPPSNDFTILAGDWYNRNHTDLKAILDNGSD LPLPDGLIINGRGSNAYTFTVDQGNTYRFRISNVGLTTSINFRIQGHKMKLVEVEGIHTLQNTYDSLDIHLGQSYSVLVTADQPPQDYYIVASTRFTSQI LTATSILHYSNSAKTVSGPPPGGLTSQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTRTIRLENSAPVINGKQRYAVNSVSFIPADTPLKLADY FKISGVFSLGSIPDNPTGGGGYLQTSVMAADFRGYVEIVFENPEDSVQSWHIDGHHFFVVGMDGGQWSAASRSNYNLGDTISRCTVQVYPKSWSAVYMPL DNVGMWNVRSEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 459 Download |
| MILNRNGVQQ RRNSWQDGVY GTNCPIPPGQ NFTYVLQVKD QIGSYFYFPS LALHKAAGGY 60 GGIKINSRPM IPVPFPPPSN DFTILAGDWY NRNHTDLKAI LDNGSDLPLP DGLIINGRGS 120 NAYTFTVDQG NTYRFRISNV GLTTSINFRI QGHKMKLVEV EGIHTLQNTY DSLDIHLGQS 180 YSVLVTADQP PQDYYIVAST RFTSQILTAT SILHYSNSAK TVSGPPPGGL TSQIDWSLEQ 240 ARSLRRNLTA SGPRPNPQGS YHYGLINTTR TIRLENSAPV INGKQRYAVN SVSFIPADTP 300 LKLADYFKIS GVFSLGSIPD NPTGGGGYLQ TSVMAADFRG YVEIVFENPE DSVQSWHIDG 360 HHFFVVGMDG GQWSAASRSN YNLGDTISRC TVQVYPKSWS AVYMPLDNVG MWNVRSENWA 420 RQYLGQQFYL RVYSPANSWR DEYPIPSNAL RCGRAVGH* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 2 | 458 | 457 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 2 | 455 | 457 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 2 | 457 | 456 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 1 | 457 | 468 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 6 | 454 | 460 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN08527.1 | 0 | 1 | 458 | 82 | 539 | Multicopper oxidase, type 1 [Medicago truncatula] |
| RefSeq | XP_002269614.1 | 0 | 1 | 458 | 79 | 536 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301616.1 | 0 | 1 | 458 | 83 | 540 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002320467.1 | 0 | 1 | 457 | 75 | 531 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524823.1 | 0 | 1 | 457 | 81 | 537 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 2e-38 | 1 | 453 | 57 | 539 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1asq_A | 2e-38 | 1 | 453 | 57 | 539 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1asp_B | 2e-38 | 1 | 453 | 57 | 539 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1asp_A | 2e-38 | 1 | 453 | 57 | 539 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1aso_B | 2e-38 | 1 | 453 | 57 | 539 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DY266221 | 399 | 59 | 457 | 0 |
| HO801725 | 439 | 22 | 458 | 0 |
| DT338359 | 325 | 128 | 452 | 0 |
| FC894644 | 281 | 59 | 339 | 0 |
| EL450831 | 299 | 11 | 309 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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