Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr2g094020.1 |
Family | GH35 |
Protein Properties | Length: 867 Molecular Weight: 96005.8 Isoelectric Point: 7.1254 |
Chromosome | Chromosome/Scaffold: 2 Start: 29077820 End: 29082948 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 29 | 355 | 0 |
LVIDGKRRVLISGSIHYPRSTPQMWPDLIQKSKDGGLDVIETYVFWNLHEPVKGQYDFDGRKDLVKFVKAVAEAGLYVHLRIGPYVCAEWNYGGFPLWLH FIPGIKFRTDNEPFKVEAEMKRFTAKIVDLMKQEKLYASQGGPIILSQIENEYGDIDSAYGSAGKSYINWAAKMATSLDTGVPWVMCQQEDAPDSIINTC NGFYCDQFTPNSNTKPKMWTENWSAWYLLFGGGFPHRPVEDLAFAVARFFQRGGTFQNYYMVLQPEMFFTSSIYYMVLFLRPYHGGTNFDRSTGGPFIAT SYDFDAPIDEYGIIRQPKWGHLKDLHK |
Full Sequence |
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Protein Sequence Length: 867 Download |
MRAFEIVLVL LWFLPKMFCT NVDYDHRALV IDGKRRVLIS GSIHYPRSTP QMWPDLIQKS 60 KDGGLDVIET YVFWNLHEPV KGQYDFDGRK DLVKFVKAVA EAGLYVHLRI GPYVCAEWNY 120 GGFPLWLHFI PGIKFRTDNE PFKVEAEMKR FTAKIVDLMK QEKLYASQGG PIILSQIENE 180 YGDIDSAYGS AGKSYINWAA KMATSLDTGV PWVMCQQEDA PDSIINTCNG FYCDQFTPNS 240 NTKPKMWTEN WSAWYLLFGG GFPHRPVEDL AFAVARFFQR GGTFQNYYMV LQPEMFFTSS 300 IYYMVLFLRP YHGGTNFDRS TGGPFIATSY DFDAPIDEYG IIRQPKWGHL KDLHKAVKLC 360 EEALIATEPK ITSLGPNLEA AVYKTGSVCA AFLANVDTKS DKTVNFSGNS YHLPAWSVSI 420 LPDCKNVVLN TAKINSASAI SNFVTKSSKE DISSLETSSS KWSWINEPVG ISKDDIFSKT 480 GLLEQINITA DRSDYLWYSL SVDLKDDLGS QTVLHIESLG HALHAFVNGK LAGSHTGNKD 540 KPKLNVDIPI KVIYGNNQID LLSLTVGLQN YGAFFDRWGA GITGPVTLKG LKNGNNTLDL 600 SSQKWTYQVG LKGEDLGLSS GSSEGWNSQS TFPKNQPLIW YKTNFDAPSG SNPVAIDFTG 660 MGKGEAWVNG QSIGRYWPTY VASNADCTDS CNYRGPFTQT KCHMNCGKPS QTLYHVPRSF 720 LKPNGNTLVL FEENGGDPTQ IAFATKQLES LCAHVSDSHP PQIDLWNQDT TSWGKVGPAL 780 LLNCPNHNQV IFSIKFASYG TPLGTCGNFY RGRCSSNKAL SIVKKACIGS RSCSIGVSTD 840 TFGDPCRGVP KSLAVEATCA YSHTDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-6 | 44 | 187 | 163 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 4.0e-20 | 22 | 347 | 367 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 1.0e-24 | 782 | 859 | 81 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 2.0e-157 | 28 | 357 | 345 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 4 | 860 | 872 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91083.1 | 0 | 18 | 859 | 18 | 841 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAC44501.1 | 0 | 18 | 859 | 26 | 839 | beta-galactosidase [Fragaria x ananassa] |
EMBL | CBI16297.1 | 0 | 1 | 859 | 1 | 845 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002314274.1 | 0 | 9 | 860 | 19 | 849 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530296.1 | 0 | 1 | 859 | 1 | 841 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3.00004e-41 | 29 | 735 | 15 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 6e-33 | 16 | 371 | 7 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 0.0002 | 531 | 678 | 409 | 570 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 6e-33 | 16 | 371 | 7 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 0.0002 | 531 | 678 | 409 | 570 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |