| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr2g100110.1 |
| Family | GH35 |
| Protein Properties | Length: 842 Molecular Weight: 93163.9 Isoelectric Point: 7.043 |
| Chromosome | Chromosome/Scaffold: 2 Start: 31841050 End: 31846232 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 36 | 338 | 0 |
| TINGQSRILISGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKY IPGISFRTDNEPFKFQMQKFTEKIVDMMKADRLFESQGGPIIMSQIENEYGPMEYEIGAPGKSYTKWAADMAVGLGTGVPWIMCKQDDAPDPVINTCNGF YCDYFSPNKDYKPKMWTEAWTGWFTEFGGPVPHRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLQQPKWGHLKD LHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 842 Download |
| MWKVPSSLVL LLLLQLACSL ICSVIASVSY DSKAITINGQ SRILISGSIH YPRSTPEMWP 60 DLIQKAKEGG LDVIQTYVFW NGHEPSPGKY YFEGNYDLVK FIKLVQQAGL YVHLRIGPYV 120 CAEWNFGGFP VWLKYIPGIS FRTDNEPFKF QMQKFTEKIV DMMKADRLFE SQGGPIIMSQ 180 IENEYGPMEY EIGAPGKSYT KWAADMAVGL GTGVPWIMCK QDDAPDPVIN TCNGFYCDYF 240 SPNKDYKPKM WTEAWTGWFT EFGGPVPHRP AEDMAFSVAR FIQKGGSFIN YYMYHGGTNF 300 GRTAGGPFIA TSYDYDAPLD EYGLLQQPKW GHLKDLHRAI KLSEPALISG DPTVTRIGNY 360 QEAHVFKSKS GACAAFLGNY NPKAFATVAF GNMHYNLPPW SISILPDCKN TVYNTARVGS 420 QSAQMKMTRV PIHGGLSWQV FTEQTASTDD SSFTMTGLLE QLNTTRDLTD YLWYSTDVVI 480 DPNEGFLRSG KDPVLTVLSA GHALHVFINS QLSGTIYGSL EFPKLTFSQN VKLIPGVNKI 540 SLLSVAVGLP NVGPHFETWN AGVLGPITLN GLDEGRRDLS WQKWSYKVGL HGEALSLHSL 600 GGSSSVEWVQ GSLVSRMQPL TWYKTTFDAP DGIAPFALDM GSMGKGQVWL NGQNLGRYWP 660 AYKASGTCDN CDYAGTYNEN KCRSNCGEAS QRWYHVPHSW LIPTGNLLVV FEELGGDPNG 720 IFLVRRDIDS VCADIYEWQP NLISYQMQTS GKTNKPVRPK AHLSCGPGQK ISSIKFASFG 780 TPVGSCGNFH EGSCHAHKSY NTFEKNCVGQ NSCKVTVSPE NFGGDPCPNV LKKLSVEAIC 840 T* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02449 | Glyco_hydro_42 | 5.0e-7 | 50 | 186 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| pfam02140 | Gal_Lectin | 5.0e-24 | 763 | 840 | 82 | + Galactose binding lectin domain. |
| COG1874 | LacA | 2.0e-25 | 28 | 330 | 351 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam01301 | Glyco_hydro_35 | 9.0e-169 | 34 | 340 | 322 | + Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 0 | 21 | 841 | 822 | + beta-galactosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96254.1 | 0 | 22 | 841 | 27 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
| GenBank | ABN08398.1 | 0 | 1 | 841 | 1 | 841 | D-galactoside/L-rhamnose binding SUEL lectin; Galactose-binding like [Medicago truncatula] |
| GenBank | ABV32545.1 | 0 | 18 | 841 | 18 | 841 | beta-galactosidase protein 2 [Prunus persica] |
| EMBL | CAC44500.1 | 0 | 18 | 841 | 20 | 843 | beta-galactosidase [Fragaria x ananassa] |
| RefSeq | XP_002327432.1 | 0 | 22 | 841 | 20 | 839 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 37 | 336 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 3.99931e-42 | 27 | 410 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 3.99931e-42 | 27 | 410 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
